Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3392 ATGGTTTCAGATCCAATAATGATTCCTAAGATGAGGATGCAAGAACAGATGGCTATAGAAGAAGCTGCTTCTGCTGGAATGAAAAGCATGGAACATTTCATCCGTGTACTTTCTTCTTCATCTTCTTCTTCTTCTTCTGATCAACGAAACCGTTTAGATCTGGTCAATAAACTTGATTGTACTGAAATTACTGATTTCACTGTTTCTAAGTTCAAAACGGTTATTAACTTATTGAATCGTACCGGTCACGCTCGTTTTCGTCGCGCACCGTCGAATTTTTCTTCTTCAACTTCTTCTTCTTCTTCTCAATTTCAATCACAGATTCAATCTGAAAAATTCAACCCTCAACCACAACCACAGTCAACTACTCTTGTTTTTGCAAAACCAACTCAAACAGTTAAGTCAATTCCAAATCTGAATCCCAAACAGAACCAATCTACCGATTTATCAATTTCTCAATACTCAAAATCCAAGGAAGCCTACAGCGTCTCCACCACTACTTCCTCCTTCCTTTCCACCATCACCGGAGACGGAAGTGTCTCCGATGGCAAAATAGGTCCTATCATTTCCTCCGGTAAGCCACCTCTCGCTTCATCTCACCGGAAAAGATGTCATGAAGCAACCGTCTCCGGCAAAGTCTCGTCCTCCGGTCCCTGCCATTGCTCCAAGAGAAGAAAATCTCGTGCGAAGAGAACAATTCGCGTTCCAGCAATAAGTTCCAAGGTTGCTGATATTCCTGCAGATGAATTCTCATGGAGGAAATACGGTCAAAAACCTATTAAAGGTTCACCTTACCCACGTGGTTACTACAAGTGCAGTAGCATCAAAGGGTGTCCGGCGAGGAAGCATGTTGAAAGGGCACAAGATGATCCAAATATGCTAATTGTGACCTATGAAGGAGAGCACCGACACTGGCAAACCATCGGAACCGTTGCCGGAGTAACCACATCTCAGGCTTCTTAA 963 0.4299 MVSDPIMIPKMRMQEQMAIEEAASAGMKSMEHFIRVLSSSSSSSSSDQRNRLDLVNKLDCTEITDFTVSKFKTVINLLNRTGHARFRRAPSNFSSSTSSSSSQFQSQIQSEKFNPQPQPQSTTLVFAKPTQTVKSIPNLNPKQNQSTDLSISQYSKSKEAYSVSTTTSSFLSTITGDGSVSDGKIGPIISSGKPPLASSHRKRCHEATVSGKVSSSGPCHCSKRRKSRAKRTIRVPAISSKVADIPADEFSWRKYGQKPIKGSPYPRGYYKCSSIKGCPARKHVERAQDDPNMLIVTYEGEHRHWQTIGTVAGVTTSQAS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3392 320 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3392 320 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3392 320 Gene3D WRKY domain 230 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3392 320 ProSiteProfiles WRKY domain profile. 241 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3392 320 SUPERFAMILY WRKY DNA-binding domain 244 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3392 320 Pfam Plant zinc cluster domain 201 244 IPR018872 -
Tpr2g3392 320 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 308 - -
Tpr2g3392 320 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 308 IPR044810 GO:0003700
Tpr2g3392 320 MobiDBLite consensus disorder prediction 89 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3392 Tpr-Chr2 37422339 37423973 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3392 1 307 WRKY Transcription Factor Family AT2G24570 51.064 1.01e-93 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g3392 WRKY 6.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3392 - - gmx:732589 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3392 2 37422339 37423973 Tpr2g3392 2 37422339 37423973 ECH
Tpr2g5739 2 66576581 66578859 Tpr2g3392 2 37422339 37423973 PCT