Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3376 ATGCGCCCACCGTTATCAAAAATCGATTATGAAGTTGGAGACAAGATTGAGGTTTGCAGCAAAGAAGAAGGGTTTATAGGTTCGTACTACGAAGCCACAATTGCTTCATGCCTTGAGAATAAGAAATATGTAGTTTGTTACAAAACCCTTCTTGAAGATGATGAATCAGGACCTCTTAAGGAGACACTTTTTCCTAAGGATATTCGTCCAATACCGCCACGTGTCCGAAATTATCACAGGTTCCAACTCAACCATAAAGTTGATGTTTTTTATAATGATGGCTGGTGGATAGGGATAATTACTAGTAAGAAGACTCTCATGCGAAAGCGTTATTACTTTAGGGTGTATTTTACAACTCTCGGTAGAATGATGTATTGTCATTGTTCTCGGATCAGGGTTCACCATGAGTTGATTTATGGAGATTGGATCTCAGAATCTTGA 441 0.3878 MRPPLSKIDYEVGDKIEVCSKEEGFIGSYYEATIASCLENKKYVVCYKTLLEDDESGPLKETLFPKDIRPIPPRVRNYHRFQLNHKVDVFYNDGWWIGIITSKKTLMRKRYYFRVYFTTLGRMMYCHCSRIRVHHELIYGDWISES* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3376 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 145 - -
Tpr2g3376 146 Pfam Agenet domain 13 73 IPR008395 -
Tpr2g3376 146 SMART agenet_At_2 79 139 IPR014002 -
Tpr2g3376 146 SMART agenet_At_2 8 76 IPR014002 -
Tpr2g3376 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 10 145 - -
Tpr2g3376 146 Gene3D - 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3376 Tpr-Chr2 37288220 37288660 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3376 20 136 PHD Transcription Factor Family AT5G58610 29.927 3.01e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3376 - - cam:101489110 196.823