Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3375 ATGTCTTCGTGTTTGAGTGGAACAGGAGCAAGATTCGATTTAGACATAGTTAAATCACCACCATGTTCATGGAGTAGAACAACATCATCACAAACATCTTCATCACCTTCATCAACAATCTCAGAATCAAGCAATTCACCACTTATTACAATCTCAACCACTAAACCCAGAACCCCCAGAAAACGACCCAACCAAACCTATAACGAAGCTGCAACACTTCTTTCAACTGCATATCCGAACCTATTCACTACTCCAAACCTAAAAACAAATCCAAATAATAAATTCACCAAATCAGAAAAAACAACAACTCATGAATTCGATTCTTCTGAACTTTTTTTACCTTTCGGAGTATTTGACACGTCATCATCTTTTTTACTTCACGGCCCAATTCATCAGCCCATTAGGCCCAATTTCCCTTCCGAGCCCAAACCGGTGAAACCGTGTCAGAGTCCCGGAGAAATTAGTTCAATGGTCAAATCCCTAGAATTGAACGATGATGATGATGATTTCGACGCCGAATCGATTCTCGATGAAGAAATTGAAGAAGGAATTGATAGTATTATGGGAGGAAGAATTCAAGAAGATGAATCTAATGTCTCTTCTTTCTCTCATCATCATCCATGGATTGGTTTTGGCGGGAAATTCGATTTCCGGTTAGGGTTACAGAGAGCTGGAGTCAGAGCTTTGAGACATGTTGATGAAGGTAATTGGTGGAATTTTCCGGCGGTTGATATGCTTAAAATTTCGCCCAAAATATGCAGTGTCGGCAACAAAACGGCGGCGCCGGTGACTGAAAAGAAGAAGAAAAAGAAAGTGGTTGCGGCGGTGGAGAAACCGAAGGAGGAGTTGTTGAAAGAAATAGTGTTGCCAAAGTCGAAAACCAACAGTTTATTGTTGAAATTGAATTACGACGGCGTTCGGAAAGCTTGGTCTGACCGGGGAACACCGTTCGCCGACGACAGCCCTGTCTCCGATGCTCCCGGAAACGATGTCAATGCACGGTTGTCACAAATAGATTTGTTGTGGGAGAATGGAGGAGGAAGTGGTGGTGTAAGAGAAGCAAGTGTGTTACGCTACAAAGAAAAACGTCGTACACGTCTCTTTTCGAAGAAGATCAGATATCAAGTGAGGAAAGTCAATGCAGATCGACGGCCAAGAATGAAGGGGCGATTTGTTAGGAGGCTGAATGGTAGCTCAAATGAACACAAAAGGTGTTTGTAG 1221 0.4259 MSSCLSGTGARFDLDIVKSPPCSWSRTTSSQTSSSPSSTISESSNSPLITISTTKPRTPRKRPNQTYNEAATLLSTAYPNLFTTPNLKTNPNNKFTKSEKTTTHEFDSSELFLPFGVFDTSSSFLLHGPIHQPIRPNFPSEPKPVKPCQSPGEISSMVKSLELNDDDDDFDAESILDEEIEEGIDSIMGGRIQEDESNVSSFSHHHPWIGFGGKFDFRLGLQRAGVRALRHVDEGNWWNFPAVDMLKISPKICSVGNKTAAPVTEKKKKKKVVAAVEKPKEELLKEIVLPKSKTNSLLLKLNYDGVRKAWSDRGTPFADDSPVSDAPGNDVNARLSQIDLLWENGGGSGGVREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNGSSNEHKRCL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3375 406 Pfam CCT motif 352 393 IPR010402 GO:0005515
Tpr2g3375 406 ProSiteProfiles CCT domain profile. 352 394 IPR010402 GO:0005515
Tpr2g3375 406 PANTHER OS02G0148000 PROTEIN 1 398 - -
Tpr2g3375 406 MobiDBLite consensus disorder prediction 23 64 - -
Tpr2g3375 406 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3375 Tpr-Chr2 37264752 37268290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3375 264 394 C2C2-CO-like Transcription Factor Family AT1G25440 42.282 1.18e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr2g3375 CCT 7.8e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3375 - - aprc:113845796 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3375 2 37264752 37268290 Tpr2g3375 2 37264752 37268290 ECH
Tpr2g3375 2 37264752 37268290 Tpr5g0707 5 11816238 11817829 PCT