Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3358 ATGGCATCATCATCATCATCATCATCAAAAGTAACATTGAAAAGTTGTTACTCTGTGAGACCAATGGAACTAACATGGTGTGGTCGATTACCATTATCCGAATGGGATCAAATTGGAATCATAACACACGTTCCAACAATTTACTTTTACCAACCTCCACAAAACTGGCTCACCCCCTCCACTAAAATCGCCACCACTTTGAAAACCTCGTTAAGCAAAGTCCTAGTACCGTTTTATCCACTAGCCGGTCGTTTACAATGGAAAGAAAATGGTCGTTTTGATATCGAGTGCAATGCATTGGGTGTTCAATTCATCGAAGCACAATCCTCGTTAGAGTTATCCGAATTAGGTGACTTTTCACCTACTTCTGAATATTACCCTTATCTTATCCCGCACGTTGATTACACACTCCCAATTCAAGATATTCCGCTAGTTATGGTGCAACTAACGCATTTCAAATGTGGGGGTATTAGCATTAGTTTGTTAGTCTCACATGCTGCTGCTGATGGACAAAGTTCGTTGCATTTCTCTAATGAGTGGGCCCGGCTCGCGCGGGGTGAGCCTTTGAAAATGGCGCCGTTTCTTGATAGAAACGTGTTGCCATCGAAAAAATATTGTAACACCGTTGTTAATGAATGGGAATTTAATCAACAACCGCCATTGTTGTTAGGAAATTCAGATAATTTTGAAGAAAGGAAGAAAAAAACAACTGTGGCTATTCTTAAAGTGAGTAAAACACAAGCTGAAAAGTTGAAAAAAACAGCCAATGAGAGTTGGGGGGAACCTAGTAATGGTCGAGGTTATACGAGGTATGAAACATTAACTGGTCATATTTGGAGAAGTGCATGTAAAGCTAGAGGGCATGGAAATGACCAACCAACCGGGCTTGGTGTTTGTGTTGATTGGAGGAGTCGTGTCGAGCCTAATTTACCAAAAGGGTATTTTGGGAATGCAACTTTGGATGTTGTGGCTACTAGTCTTTCAGGTGATTTAATGTCTAAGCCTTTAGGGTATGCTTCAAGTAGGATAAGGGAAGCTATTGAAAAAGTGAATGATGAGTATGTTAGATTGTGGTTTGAGTATTATAAGAAACAAGAAGATTTTACTAAGTTTCAAGATCTTCGTGAGATCTTAGGGAGTGATGAAAAAGGTCCATTTTATGGTAATCCTAATTTAGGTGTGGTTAGTTGGTTAACATTGCCAATTTATGGACTTGATTTTGGGTGGGGGAAAGAGGTTTATATGGGGCCAGGAACACATGATATGGATGGTGATTCTTTGCTTCTTCCTAGTCATGAAGATGATGGATTGTTGGTTGCTATTTGTTTGCAAGAGGTTCATATGGATGAGTTCAAGAGGCATTTTTATGAAGACATTGTGTGA 1383 0.397 MASSSSSSSKVTLKSCYSVRPMELTWCGRLPLSEWDQIGIITHVPTIYFYQPPQNWLTPSTKIATTLKTSLSKVLVPFYPLAGRLQWKENGRFDIECNALGVQFIEAQSSLELSELGDFSPTSEYYPYLIPHVDYTLPIQDIPLVMVQLTHFKCGGISISLLVSHAAADGQSSLHFSNEWARLARGEPLKMAPFLDRNVLPSKKYCNTVVNEWEFNQQPPLLLGNSDNFEERKKKTTVAILKVSKTQAEKLKKTANESWGEPSNGRGYTRYETLTGHIWRSACKARGHGNDQPTGLGVCVDWRSRVEPNLPKGYFGNATLDVVATSLSGDLMSKPLGYASSRIREAIEKVNDEYVRLWFEYYKKQEDFTKFQDLREILGSDEKGPFYGNPNLGVVSWLTLPIYGLDFGWGKEVYMGPGTHDMDGDSLLLPSHEDDGLLVAICLQEVHMDEFKRHFYEDIV* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3358 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 459 - -
Tpr2g3358 460 Gene3D - 225 458 IPR023213 -
Tpr2g3358 460 Gene3D - 5 216 IPR023213 -
Tpr2g3358 460 Pfam Transferase family 10 457 - -
Tpr2g3358 460 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 13 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3358 Tpr-Chr2 37125682 37128409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3358 10 457 Monolignol Biosynthesis Gene Families AT5G48930 39.024 2.91e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3358 K13065 - gmx:100777007 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3358 2 37125682 37128409 Tpr2g3358 2 37125682 37128409 ECH