Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3353 ATGGAGGCACAACAACAAAATAAAAGAAGACGTGTTTACTCTATGGAACCAAACAAAATAGTGCAATCTATTTTTGCTAGAAACTATTTAAGCTATTTAGTTTCAGCATTGATGAAGATAAAGGAAAATACTAGTTCTTCAAAAGATCATAATGATATTTGCAAAAATGTTAAGTATGAAGTGGAAATGGCAATGGTTTTGTCAGCACAAGGTTTTGCATGGAGTAATGGTCTTAAAGTCAAGCTTCAAAGGGAACATATCAACAATGTAGCTACAACTGAGGGTGATAATAATAAGTTTGAGTCTTACAATTTGGGAATGGAAAAGGATTTAGTTAGAGAAGATAAAGAAGATGAGGAGAAGATGAAGAACTTGATGAGTTTGATACCTGGTGGAGAAGAAATTTGTGATGAACAAGTTGTTAATGAATTAGAAAGTTATATAAAATGTTTGCATATGCAGGTGAATGTTCTTCAATGTTTGATTGCAGAGACATGTTGA 501 0.3234 MEAQQQNKRRRVYSMEPNKIVQSIFARNYLSYLVSALMKIKENTSSSKDHNDICKNVKYEVEMAMVLSAQGFAWSNGLKVKLQREHINNVATTEGDNNKFESYNLGMEKDLVREDKEDEEKMKNLMSLIPGGEEICDEQVVNELESYIKCLHMQVNVLQCLIAETC* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3353 166 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 109 164 IPR044660 GO:0006355
Tpr2g3353 166 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 92 IPR044660 GO:0006355
Tpr2g3353 166 PANTHER TRANSCRIPTION FACTOR BHLH146 109 164 - -
Tpr2g3353 166 PANTHER TRANSCRIPTION FACTOR BHLH146 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3353 Tpr-Chr2 37101142 37101801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3353 1 166 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 37.572 5.08e-27 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3353 - - mtr:MTR_4g127700 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3353 2 37101142 37101801 Tpr5g0665 5 10782684 10783756 PCT