Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3351 ATGGCTGGAAAAGATTCCATTTCTCTTGAGGAAATCAAGAATGAAACGGTTGATCTGGAACGTATCCCTGTCGAGGAAGTTTTCGAGCAACTGAAATGTACCAAAGAAGGTTTGTCCTCGGAGGAAGGAGCCCATCGGCTCGAAATATTTGGACCAAACAAGCTAGAGGAGAAAAAGGAGAGCAAACTTCTCAAGTTTCTTGGGTTCATGTGGAATCCTCTGTCATGGGTTATGGAGGCTGCCGCTTTGATGGCAATTGGTCTTGCAAATGGTGACGGGAAGCCCCCGGATTGGCAGGATTTTGTCGGTATTGTTTGCTTGTTGGTGATCAACTCTACCATCAGTTTTATAGAGGAAAACAATGCGGGTAATGCCGCTGCGGCTCTTATGGCTGGTCTTGCTCCCAAGACAAAGGTTCTTAGGGATGGTAAATGGAGTGAGCAAGAAGCTGCAATTCTAGTCCCTGGAGATATCATTAGCATCAAGCTAGGTGATATTGTTCCAGCTGATGCTCGTCTTCTCGAAGGTGATCCTTTAAAGATTGATCAGTCTGCTTTGACTGGAGAATCACTTCCTGTGACTAAACATCCTGGGCAAGAAGTTTACTCTGGCTCAACTTGTAAACAAGGTGAAATTGAAGCTGTTGTCATTGCAACTGGTGTCCACACTTTTTTCGGGAAAGCAGCTCATCTTGTGGACAACACCAACCAAGTTGGACATTTCCAGAAGGTGCTTACAGCAATTGGAAACTTCTGTATCTGTTCCATTGCAGTTGGTATGTTGGCTGAGATCATAGTCATGTACCCTATTCAACACCGAAAGTACAGAGACGGAATTGACAACCTTTTGGTCCTTTTGATCGGAGGAATTCCCATCGCCATGCCCACGGTGTTGTCCGTAACAATGGCCATTGGTTCACACAGGCTTTCTCAACAAGGAGCTATTACCAAACGTATGACTGCTATTGAAGAAATGGCTGGTATGGATGTACTTTGCAGTGACAAGACGGGTACACTCACACTTAACAAGTTGAGTGTTGACAAGAACTTGATTGAGGTCTTTGAAAAGGGTGTGGACAAGGAACATGTTATGCTTCTTGCTGCAAGGGCTTCCAGGATTGAAAACCAGGATGCAATAGATGCCGCCATTGTTGGAACTCTAGCTGACCCAAAAGAGGCAAGGGCTGGGGTAAGAGAAGTCCACTTTTTACCCTTCAACCCCGTTGATAAGAGAACTGCCTTGACTTACATTGATGGCAATGGGAATTGGCACCGGGCAAGCAAAGGTGCTCCAGAGCAGATCATGGAGCTGTGTAAACTTAGGGAAGATACAAAGAGGAACATCCATGCTATTATTGACAAGTTTGCAGAGAGAGGTCTTCGTTCTCTTGCTGTTTCTAGACAGGAAGTTCCTGAGAAAACTAAAGAAAGCCCCGGTGCTCCTTGGCAGTTTGTTGGTTTGCTGTCACTTTTTGACCCACCTAGGCATGACAGTGCTGAAACTATTCGCAGAGCACTTCATCTTGGTGTCAATGTTAAAATGATTACTGGTGATCAACTTGCCATAGCAAAGGAGACTGGCCGAAGACTTGGGATGGGAACTAACATGTATCCATCTTCTACCTTGCTTGGTCAAGACAAAGATGCAAATATTGCCGCAATTCCAGTTGAAGAGCTGATCGAGAAGGCAGATGGATTTGCTGGAGTATTTCCAGAGCACAAATATGAAATTGTAAAGAAGTTGCAAGAAAGGAAGCACATTTGTGGAATGACCGGTGATGGTGTCAACGATGCTCCAGCTTTGAAAAGGGCTGACATTGGTATTGCTGTTGCTGATGCTACGGATGCTGCAAGGGGTGCTTCTGATATTGTCTTGACAGAACCTGGATTGAGTGTTATCATCAGTGCAGTCTTAACCAGTAGAGCTATTTTCCAAAGAATGAAAAACTACACGATCTATGCAGTATCTATCACTATTCGTATAGTGTTTGGCTTCATGTTCATTGCATTGATCTGGAAGTTTGACTTCTCTCCTTTCATGGTCTTGATTATTGCCATTCTTAATGATGGAACAATCATGACAATTTCCAAAGATAGGGTGGTGCCATCTCCATTGCCTGATAGCTGGAAACTAAAGGAGATATTTGCTACTGGGATTGTTCTTGGAGGGTATTTAGCCCTGATGACTGTAATCTTCTTCTGGGCAATGAAAGAAAACAAATTCTTCCCTGACAAATTTGGAGTTAGACACTTGAATCATGATGAAATGATGTCTGCTTTGTATCTACAAGTCAGTATTGTTAGCCAGGCTCTGATCTTTGTGACTCGTTCCCGTGGTTGGTCGTTTCTTGAACGCCCCGGAGCTCTATTAGTTATTGCTTTCCTCATTGCTCAACTGATTGCTACATTAATAGCAGTATATGCTAACTGGGGATTCGCAAAGGTACAAGGAATTGGTTGGGGTTGGGCAGGAGTAATTTGGCTCTACAGTGTTGTCTTCTATATTCCCCTTGATGTGATGAAGTTTGCCATCCGCTACATATTGAGTGGCAAGGCTTGGATGAATATGCTAGAAAACAAGACTGCGTTCACCACCAAGAAAGACTATGGAAAAGAAGAGAGGGAAGCTCAGTGGGCACTTGCTCAGAGGACTCTACATGGACTTCAACCACCAGAAGCTTCTGGCATTTTCAATGAGAAGAGCAGTTACAGAGAACTGTCCGAGATTGCTGAGCAGGCAAAGAGAAGAGCCGAAGTTGCAAGGCTTCGTGAGCTTCACACACTCAAAGGACATGTTGAATCTGTGGTGAAGCTGAAAGGTTTGGACATTGATACTATCCAGCAGCACTACACCGTGTAA 2859 0.4421 MAGKDSISLEEIKNETVDLERIPVEEVFEQLKCTKEGLSSEEGAHRLEIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAALMAIGLANGDGKPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKHPGQEVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFEKGVDKEHVMLLAARASRIENQDAIDAAIVGTLADPKEARAGVREVHFLPFNPVDKRTALTYIDGNGNWHRASKGAPEQIMELCKLREDTKRNIHAIIDKFAERGLRSLAVSRQEVPEKTKESPGAPWQFVGLLSLFDPPRHDSAETIRRALHLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSTLLGQDKDANIAAIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVVPSPLPDSWKLKEIFATGIVLGGYLALMTVIFFWAMKENKFFPDKFGVRHLNHDEMMSALYLQVSIVSQALIFVTRSRGWSFLERPGALLVIAFLIAQLIATLIAVYANWGFAKVQGIGWGWAGVIWLYSVVFYIPLDVMKFAIRYILSGKAWMNMLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASGIFNEKSSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3351 952 Gene3D - 329 628 IPR023214 -
Tpr2g3351 952 Pfam haloacid dehalogenase-like hydrolase 328 605 - -
Tpr2g3351 952 Gene3D - 344 491 IPR023299 GO:0000166
Tpr2g3351 952 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 848 IPR023298 -
Tpr2g3351 952 SUPERFAMILY HAD-like 328 638 IPR036412 -
Tpr2g3351 952 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 37 807 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr2g3351 952 Gene3D - 97 816 - -
Tpr2g3351 952 PANTHER PLASMA MEMBRANE ATPASE 4 932 - -
Tpr2g3351 952 Gene3D - 135 219 - -
Tpr2g3351 952 Coils Coil 903 923 - -
Tpr2g3351 952 SFLD Haloacid Dehalogenase 314 642 - -
Tpr2g3351 952 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Tpr2g3351 952 PRINTS P-type cation-transporting ATPase superfamily signature 614 626 - -
Tpr2g3351 952 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Tpr2g3351 952 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 PRINTS H+-transporting ATPase (proton pump) signature 591 607 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 PRINTS H+-transporting ATPase (proton pump) signature 622 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 Gene3D - 901 952 - -
Tpr2g3351 952 CDD P-type_ATPase_H 37 842 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr2g3351 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 104 539 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 566 680 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr2g3351 952 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Tpr2g3351 952 Pfam Cation transporter/ATPase, N-terminus 22 84 IPR004014 -
Tpr2g3351 952 SFLD p-type atpase 314 642 IPR044492 -
Tpr2g3351 952 PANTHER CALCIUM-TRANSPORTING ATPASE 4 932 - -
Tpr2g3351 952 Pfam E1-E2 ATPase 134 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3351 Tpr-Chr2 37089495 37096863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3351 8 952 Primary Pumps ATPases AT4G30190 84.796 0.0 1656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3351 K01535 - gmx:100816905 1728.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3351 2 37089495 37096863 Tpr5g0662 5 10735092 10743679 PCT