Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3344 ATGGCTTCCGATTCGTCCTCCCAAGGTGTTGCTCTTGATCCTTCGAAATTTAGTAAAATGAGTATGGAGAGAAAAAGAGAGCTTGTATATGAAATATCTAAAGTGTCTCGTGATGGTGCATCTGAGATGCTGCAGTCGTGTAGCCGTCAAGAGATTTTGCAAATATTGTGTGCTGAGATGGGAAAAGAAAGGAAGTATACTGGCCTGACAAAGGTGAAAATTATTGAAAATCTTCTAAAAATTGTTTCCGAAAAGAATTCAAGTGGACATGATATTGCCACCGACCTTGAACCACATTCTTTTCCTGCAAACAGTCAGAAACCGGCTAAAAGGCAGAGAAAAACTGAGAATCCATCTCGGTTAGCTATTCCGGCAAACAATGTTTTAGTCAATAATGGTGACGATGCGAGTAATAATACTACATACTGCAAAAACTCAGCATGCAAGGCTACCCTAAATCAAGCAGATGCATTTTGCAAAAGATGTTCATGTTGTATTTGTCATCAATATGATGACAACAAAGACCCTAGTCTGTGGTTAATATGCAGCTCTGAAGCTCCATTTCCCGGTGTTTCCTGTGGCTTGTCATGCCACCTTGAGTGTGCTTTAAAACATGCTGGTTCTGGAATTGGCAAAGACGGTGAACATCCCAAACTTGATGGAGGCTTCTACTGTGTCTCATGTGGGAAAGTAAATGATTTACTCGGATGCTGGAGAAAACAACTGATGGTAGCAAAGGATGCTAGACGTGTGGACATACTATGCTATCGTGTCTCCTTAAGTCAAAAACTTTTGCAAGGGACTGAAATGTATGGAGAACTTTATGAAATTGTTGATCAAGCAGTGAAGAAACTTGAACCGGAGGTGGGTCCACTGACTGGCTCACCACTGAAGATTGGTAGGGGGATTGTGAACAGGCTTTCTTCAGGACCTGAGGTTCAGAAACTTTGTGGTGTTGCTCTTGAATCACTTGATTCAATGCTTTCTAAAAGGATCTTGCCTCCGACGCCCAATCCAACTATTCAAGTTTCAGATGGAAGTTTACTAGGGCCAAATATGGTGAGGTTTGAAGATGTCACTGCAACATCCCTCACTGTTATTTTGTGTTTGGAAGATCCTTCTGGAGAAAATAATGGTGGTTACGCCGTGTGGCATCGCAAGGCTGATGATGCGAACTATCCATTGGACCCAACTTGCATGAATCTCCTACCAAATAGAAGACTCGACATCAGGGATTTACTTCCAGCTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTTGAGGAAGTCAGGTATCTGCGAAGTTCAAGTCTCAACAGAGCATGGTGAGGATGAAGTCCCAAATTGTTCAGCAACGGAAAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGTCTTTCCAATCCATCATCAGTGGAAGATGAAACTAATCATAGCGACCAGACCGACAATCGATCAGATAATTATCCTATTTATCACAAGGATAGCAACCAGCTTGCTTCTGAAAATTTATCTAATGATGCTATTAACTGTTCCAATTTGGGCGGAGTGGGACGTCCAACTGATGCAGATTCCTTGTCAGACAAGCAGGTTGCTGTAGGAATGACCGGCACTATACCTAGTTCTGATGCACTAAAGCTTGAAAACAAGCATTCGGGAGAGGAACAAGTAACCGAGGACATGAGCACCGATGATGGGTCAGTTCCAACAGGAAGGGAATGTGTTCCGTTAGCAGGTACCTCAAAAGGGGGATTGCCTAATACTCCCGGCAGGTTGGAATTACTTAAAGATGGCCCGGGAAGAAAAGGTAGATCTAAATTAAGTGGCAAAGATCTAGAAAATGGATCTGGGAAAAGGGGTGGTCCTCGAGATGGAAGCACATCCAAGAAGAGAAGTGGTGAAAGGCAAGGCGAAGGCTGTGAGGGAAATGGTTTTCCGGATCGGGATTTCGAATATTATGTGAAGGTGATTAGATGGTTAGAGTGTGAAGGACACATAGAAAAGAACTTCAGACAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACCCCTGAAGAAATAAGGATTGTGAAAATATATGTAGATACATTTCATGAAGATCCGGCTTCTCTTGCTGAGCAACTTGTGGACACCTTCTCAGATTGTGTATCAAACAAGAGATCATCGGTTCCTGCAGGGTTCTGCATGAAGCTTTGGCATTGA 2202 0.4269 MASDSSSQGVALDPSKFSKMSMERKRELVYEISKVSRDGASEMLQSCSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKNSSGHDIATDLEPHSFPANSQKPAKRQRKTENPSRLAIPANNVLVNNGDDASNNTTYCKNSACKATLNQADAFCKRCSCCICHQYDDNKDPSLWLICSSEAPFPGVSCGLSCHLECALKHAGSGIGKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLMVAKDARRVDILCYRVSLSQKLLQGTEMYGELYEIVDQAVKKLEPEVGPLTGSPLKIGRGIVNRLSSGPEVQKLCGVALESLDSMLSKRILPPTPNPTIQVSDGSLLGPNMVRFEDVTATSLTVILCLEDPSGENNGGYAVWHRKADDANYPLDPTCMNLLPNRRLDIRDLLPATEYSFKVVSNDLRKSGICEVQVSTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNHSDQTDNRSDNYPIYHKDSNQLASENLSNDAINCSNLGGVGRPTDADSLSDKQVAVGMTGTIPSSDALKLENKHSGEEQVTEDMSTDDGSVPTGRECVPLAGTSKGGLPNTPGRLELLKDGPGRKGRSKLSGKDLENGSGKRGGPRDGSTSKKRSGERQGEGCEGNGFPDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPEEIRIVKIYVDTFHEDPASLAEQLVDTFSDCVSNKRSSVPAGFCMKLWH* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3344 733 MobiDBLite consensus disorder prediction 439 489 - -
Tpr2g3344 733 MobiDBLite consensus disorder prediction 444 475 - -
Tpr2g3344 733 CDD FN3 351 424 IPR003961 GO:0005515
Tpr2g3344 733 CDD PHD_VIN3_plant 163 228 - -
Tpr2g3344 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 733 IPR044514 GO:0010048|GO:0040029
Tpr2g3344 733 Pfam PHD - plant homeodomain finger protein 143 262 IPR032881 -
Tpr2g3344 733 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 733 - -
Tpr2g3344 733 MobiDBLite consensus disorder prediction 91 117 - -
Tpr2g3344 733 MobiDBLite consensus disorder prediction 538 641 - -
Tpr2g3344 733 MobiDBLite consensus disorder prediction 595 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3344 Tpr-Chr2 37016716 37022194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3344 4 611 PHD Gene Family AT4G30200 47.179 4.15e-159 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3344 - - gmx:100794721 1198.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3344 2 37016716 37022194 Tpr2g3344 2 37016716 37022194 ECH