Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3342 ATGAACACGAGCCAGTTCGACGGTAACGCAGCATTCGCCGGCGGCGGATTCATGCCTTCTCAGACCACTCAGGGAGCTAACTCTCCCTTCACTCCCTCCAAGATTCGTGATAGTCAGACATTGCTTCCTTTGACGATAAAGCAGGCCAATGATGCTTTTCAGTCAAGCGATGGTTCCAATCTTACTATTGATGGTGTCGATGTTAACACTGTTACTTTTGTAGGTAGGGTGTGCAACAAAGTTGATCAAATTACTGATTCTAAATTTGTACTTGATGATGGTACAGGAACGATTGAGTGCATTAAATGGATTGATGATCCTGTAGATTCAAATGAAGTGGATGGTATCTTGAATGGAATGTATGTGCGACTATATGGACAATTTAAAGGTTTGCAGGGTAAAAAATGCATAAATGTTTATTCTTTAAGGCCCGTGACTGACTTCGATGAGATTGCCAACCATTTCATTAATTGCATATATGTTCATCTATATAATTCGAGGTTACAGCGTATCCAAGCTAGCATCCCCAATCAGCAACATGTTCCCAGTTTGACACAAATCACCCCCACAAAAGGTTATCAAGCTCAAGCCGTAGCAGCAAATCAATTCTCTGGTCAGCATAATAATGGTCAGAAGACTGTTGAAGATATGGTGTTAGATGTTTTGCATCTTCCCGCAAACAGGACAAGGACTGAGGGGTGCCCTCTTGAATCTATTGCACAGCATCTTGGACTTCCTTCGGATAAAATCATGCTGGCTATTCATAATCTTACCCAAGAAGGTATGATTTATGAAGGTCTAACTAATCACTATAAGTCAACTGTGAACGGTTGA 834 0.4137 MNTSQFDGNAAFAGGGFMPSQTTQGANSPFTPSKIRDSQTLLPLTIKQANDAFQSSDGSNLTIDGVDVNTVTFVGRVCNKVDQITDSKFVLDDGTGTIECIKWIDDPVDSNEVDGILNGMYVRLYGQFKGLQGKKCINVYSLRPVTDFDEIANHFINCIYVHLYNSRLQRIQASIPNQQHVPSLTQITPTKGYQAQAVAANQFSGQHNNGQKTVEDMVLDVLHLPANRTRTEGCPLESIAQHLGLPSDKIMLAIHNLTQEGMIYEGLTNHYKSTVNG* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3342 277 Gene3D - 205 275 IPR036388 -
Tpr2g3342 277 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A-LIKE 6 277 - -
Tpr2g3342 277 PIRSF RPA32 1 275 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Tpr2g3342 277 PANTHER REPLICATION PROTEIN A-RELATED 6 277 IPR040260 -
Tpr2g3342 277 SUPERFAMILY "Winged helix" DNA-binding domain 210 274 IPR036390 -
Tpr2g3342 277 Gene3D - 34 167 IPR012340 -
Tpr2g3342 277 CDD RPA2_DBD_D 70 163 - -
Tpr2g3342 277 Pfam Replication protein A C terminal 162 265 IPR014892 -
Tpr2g3342 277 SUPERFAMILY Nucleic acid-binding proteins 41 166 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3342 Tpr-Chr2 36989199 36993146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3342 6 225 Core DNA Replication Machinery Family AT3G02920 46.188 6.38e-66 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3342 K10739 - gmx:100782819 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3342 2 36989199 36993146 Tpr2g3342 2 36989199 36993146 ECH