Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3330 ATGGATACTGATGAAGAGTGCTCAATTTTTCTTCAGTTATCTGAAAATGATCCTTTCTTTGATGAAAAGAAGAAATTACTACGATGTAAAGGGTTTAATCCCAAGGAACGGATATATCTCAGGTGCTCCTCAGAACCTCATTGGATGAATGATACTGTGAAGACCTTACTTCAGATTGCAAGGATCATACAGTTAAATGAGCTGGAACTATATTTTGCTGAAGAGGATGCCTCAGTCGAGTTTTACAGCTCCAGGAATGAGTTGGAGGCTCTCAATTCAATTATTTTGCTCACCGACAAATCGCTTTCTAGTTGTCAACATTCCCATACAAATATGCTGCAAGGGTTACGGCAAACAATTCTTGATTTAATTTCTGATTTTGGGGACCAAAATAATCTGAAGGGAGTACTTGAAAAGTACCACAGTTGTGAGAAAGAAGAACACCTGATCAAGTGGGGTAAAAGCCATGGTGCAAAGACACAATTAAAGATAGCTTATGTTGAAGGAGCGGGTCGGGGAATGATAGCAGAGAAAGATCTAAAAGTTGGAGATATTGCTTTAGAAATTCCTGTGTCCATTATCATTTCCGAGGAGCTTGTGCTTGAGACTGATATGTACCGTGTCTTAAAAGAGGTTGATGGCATATCATCTGAGACAATATTGCTATTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAATGTTATTTTGACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTTGGGATTGAAGCGATTACAATGTTAGATGGAACCTTGCTGTTTGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGATGAGTTGTTTCCTGCTCTGTGCAATGGTTTTCCTGATATATTTCCTCCAGAGCTGTACACGTGGGAGAATTTTTTATGGGCTTGTGAACTTTGGTATTCCAATAGCATGAAGATAATGTTTTCAGATGGAGAGCTGAGGACATGTTTGATCCCTGTTGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTATGCACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGTTACGGGAACTTCTCCAGCTCTCATTCTATTACATTTTATGGTTTCTTACCTCGAGGAGATAACCCGTATGATGTCATTCCTTTAGACATTGATAGTTCAGATATTGATTCTATCGAGGATAAACCTGTGTCCAACTGGGCGGTTCACATGGTGCGTGGTACATGGCTCTCCAACAATCACAGCATATTCTATTATGGCCTTCCCTCTCCATTATTGAATCATCTTCGGAGATCTCGAAGCCCGCTGCTACAAACAAAGACTGTCTTGCAAGGAAACTTGGAAAATGAGCTGGAAGTTCTTGGAGATCTTAAAGACATCTTTGATGACATGATGGACAATATGGGTGATATCGATCTTGATGACAGAGAAAACTACAGTTGGGATGAAAAATTGGCTGTGGATTTTAAAAATCTACAAAGACGAATTGCTCATTCCATTTCAATTTCATGTCAAACTGGAGTAAGCATGTTAAAGAATGAACTGCGCAAGTGTTTGGCTGAGGACATCCTAGGCTAA 1644 0.3911 MDTDEECSIFLQLSENDPFFDEKKKLLRCKGFNPKERIYLRCSSEPHWMNDTVKTLLQIARIIQLNELELYFAEEDASVEFYSSRNELEALNSIILLTDKSLSSCQHSHTNMLQGLRQTILDLISDFGDQNNLKGVLEKYHSCEKEEHLIKWGKSHGAKTQLKIAYVEGAGRGMIAEKDLKVGDIALEIPVSIIISEELVLETDMYRVLKEVDGISSETILLLWSMKEKYNCDSKFKCYFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQARQHLHAQYDELFPALCNGFPDIFPPELYTWENFLWACELWYSNSMKIMFSDGELRTCLIPVAGFLNHSLCPHIMHYGKVDPSTNSLKFCLSRPCRSGEECCLSYGNFSSSHSITFYGFLPRGDNPYDVIPLDIDSSDIDSIEDKPVSNWAVHMVRGTWLSNNHSIFYYGLPSPLLNHLRRSRSPLLQTKTVLQGNLENELEVLGDLKDIFDDMMDNMGDIDLDDRENYSWDEKLAVDFKNLQRRIAHSISISCQTGVSMLKNELRKCLAEDILG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3330 547 Pfam Rubisco LSMT substrate-binding 15 107 IPR015353 -
Tpr2g3330 547 SUPERFAMILY SET domain 145 399 IPR046341 -
Tpr2g3330 547 Gene3D - 2 123 IPR036464 -
Tpr2g3330 547 CDD SET_LSMT 162 392 - -
Tpr2g3330 547 ProSiteProfiles SET domain profile. 160 378 IPR001214 GO:0005515
Tpr2g3330 547 Gene3D set domain protein methyltransferase, domain 1 143 392 - -
Tpr2g3330 547 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 3 543 - -
Tpr2g3330 547 Pfam SET domain 171 378 IPR001214 GO:0005515
Tpr2g3330 547 PANTHER BNAA07G01600D PROTEIN 3 543 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Tpr2g3330 SET 6.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3330 K19199 - gmx:100778605 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3330 2 36876619 36884876 Tpr2g3330 2 36876619 36884876 ECH