Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3328 ATGAAAGAATATTGGACTTCTCTTGCATCAATTCTTGGTGTATTTGCTTTCTGCCAAACAATCCTACAAACAGTTTTCCCACCAGAGCTTCGTTTCGCTTCAGCGAAACTTCTTAACAGAATCTTTAACTGCTTCTCAACTTACTGTTACTTCGAAATAACAGAAATTGACGGCGTTAACACCAACGAACTCTACAACGCAGTTCAACTTTACCTAAGTTCCTCCGTTTCAATCACCGGTAACCGTTTAAGCCTAACACGCGCCGTTAACTCAAGCGCCTTCACATTCGGTCTAGCAAACAATGACAGTATCGTTGATACATTTAACGGCGTTAACGTCGTTTGGGAACACGTCGTTACACAGAGAAACTCTCAAACATTTTCATGGCGTCCATTACCAGATGAAAAACGCGGTTTCACTCTTCGAATAAAGAAAAATCACAAACACTTGATTTTAAACTCTTATTTGGATTACATTATGGAAAAAGCGAGTGATATTCGTAGAAAAAATCAAGATCGTTTGTTATACACAAATTCAAGAGGTGGATCGTTGGATTCAAGAGGTCATCCATGGGAATCTGTGCCGTTTAAACATCCAAGTACTTTTGATACATTGGCTATGGATCCTGAAAAGAAGAAAGAAATTATGGAAGATTTGATTGATTTTGCAAATGGACAAAGTTTTTATCATAAAACGGGTCGGGCTTGGAAAAGAGGGTACTTACTTTATGGTCCACCAGGAACTGGAAAATCTAGCATGATTGCTGCTATGGCTAATTTTCTTGGTTATGATATTTATGATTTGGAATTAACTGAAGTTCATAATAATTCTGAACTTAGAAAGCTTCTTATGAAAACTAGTTCTAAATCGATTATTGTTATTGAAGATATTGATTGTTCTATTAATCTCTCTAACAGAAAAAAGAACAAAAATAACGGTTCTGCTGTTAGTTCTGTTAATTCTGTTTCAGTTTCGTCGAGGAGTTATTATGATACCGGTGTTGGTGGTGGTGGTGAAGAGAATGGTAATTCAATAACGCTTTCTGGTTTATTGAATTTTACTGATGGATTATGGTCTTGTTGTGGTAGTGAGAGGATTTTTGTTTTTACTACGAATCACATTGAGAAGCTTGATCCTGCTTTGTTAAGGAGTGGGAGAATGGATATGCATATTTTTATGAGTTATTGTTCAATGCAAGCTTTGAAGATTTTGTTGAAGAATTATTTGGGTGTTGATTTGGATGACTCTGTTTTGAAGGAATTGGAGGAAGTTATTGAAATGGCGAGGATGACACCGGCTGATATAAGTGAGGTTTTGATTAAGAATAGGAGGAAGAAAGAGAAAGCTGTTGATGAATTGTTGGAGATTTTGAAGGTGAGAGGTGAAAGGAATGGAAAGAATGGTGATGTGAGAGAGAAAGATGATGGTGATGATGATGAAGAGGAAGAGCAAGAGAAAAGGGCACTTGATAGTGATAGTCCTAAACAAGAATCTGAGATTGAAGATGATTGCAAGGAAGGATTAGAGGAAGAAGAGAAGATTAAGTGA 1548 0.3676 MKEYWTSLASILGVFAFCQTILQTVFPPELRFASAKLLNRIFNCFSTYCYFEITEIDGVNTNELYNAVQLYLSSSVSITGNRLSLTRAVNSSAFTFGLANNDSIVDTFNGVNVVWEHVVTQRNSQTFSWRPLPDEKRGFTLRIKKNHKHLILNSYLDYIMEKASDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPEKKKEIMEDLIDFANGQSFYHKTGRAWKRGYLLYGPPGTGKSSMIAAMANFLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSINLSNRKKNKNNGSAVSSVNSVSVSSRSYYDTGVGGGGEENGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSMQALKILLKNYLGVDLDDSVLKELEEVIEMARMTPADISEVLIKNRRKKEKAVDELLEILKVRGERNGKNGDVREKDDGDDDEEEEQEKRALDSDSPKQESEIEDDCKEGLEEEEKIK* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3328 515 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
Tpr2g3328 515 PANTHER BNAC03G12930D PROTEIN 2 507 - -
Tpr2g3328 515 Pfam ATPase family associated with various cellular activities (AAA) 241 394 IPR003959 GO:0005524|GO:0016887
Tpr2g3328 515 MobiDBLite consensus disorder prediction 464 515 - -
Tpr2g3328 515 Gene3D - 392 455 - -
Tpr2g3328 515 SMART AAA_5 236 397 IPR003593 -
Tpr2g3328 515 PANTHER BCS1 AAA-TYPE ATPASE 2 507 - -
Tpr2g3328 515 MobiDBLite consensus disorder prediction 487 515 - -
Tpr2g3328 515 CDD AAA 237 298 - -
Tpr2g3328 515 Gene3D - 192 391 IPR027417 -
Tpr2g3328 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 445 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3328 Tpr-Chr2 36867665 36869373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3328 210 431 Calmodulin-binding Proteins AT3G56690 26.357 3.93e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3328 2 36867665 36869373 Tpr2g3328 2 36867665 36869373 ECH