Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3319 ATGAATAATTTTCATCTTAATACTTCTCTTCACTTAAACCAACCAGGACATAATAATGAGAATATGAATCATAATCTGAATCTAGAACTTGTCCTTGAACCATCTTCTTCTTCATCATCATCATCTTCACCTATAATAGAGCAAAGGGTATTTTCATGCAACTATTGTCAAAGAAAGTTTTACAGCTCTCAAGCTTTAGGAGGACACCAAAATGCTCATAAGCTTGAAAGGACACTTGCAAAGAAAAGTTGGGAGATAAGTTCAGCCATGCAATCTTCTAATTATGTTGAATTACCAGAACACCCTTCATCAAACTTCAATTCTCATTTTGATCATAACAATCATGTGATGAGATATGGTGGTGGTGGAAGAAAAGATAAGTTTAGTTATGGTAATTCTAAGGAAGGTCATGTGGCTTCTTGGTCAAGGGGTTATAATACTACTACTTCTGAACATGTTCAAGAGGATATTAGCCAACTTGATTTGTCCTTAAGACTTTGA 501 0.3453 MNNFHLNTSLHLNQPGHNNENMNHNLNLELVLEPSSSSSSSSSPIIEQRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSWEISSAMQSSNYVELPEHPSSNFNSHFDHNNHVMRYGGGGRKDKFSYGNSKEGHVASWSRGYNTTTSEHVQEDISQLDLSLRL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3319 166 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Tpr2g3319 166 SUPERFAMILY beta-beta-alpha zinc fingers 47 78 IPR036236 -
Tpr2g3319 166 PANTHER ZINC FINGER PROTEIN 2 24 166 - -
Tpr2g3319 166 PANTHER ZINC FINGER PROTEIN JAGGED 24 166 IPR045320 GO:0003700
Tpr2g3319 166 Gene3D Classic Zinc Finger 16 114 - -
Tpr2g3319 166 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3319 Tpr-Chr2 36808697 36809282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3319 3 166 C2H2 Transcription Factor Family AT5G57520 49.412 9.68e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g3319 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3319 - - aip:107620426 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3319 2 36808697 36809282 Tpr2g3319 2 36808697 36809282 ECH