Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3308 ATGTGTAATAAAGGGTTTCAATGCTTGAGCGAGTCTGAGACTATAATTGATCATAGACAGCATTTTATTATGATGGATAGTCCTACAGCCGTTAGATCGCCGGCCACAGCCACCACAACCGGTTCCGGTTCAAATGATGATGGTCGGCGTGTTAAATTTTTGTGTAGTTTTCTAGGTAGTATAATGCCACGTCCACAAGATGGGAAACTACGATATGTTGGTGGAGAGACGAGAATTGTGAGTGTTTCGAGAGATATTAGCTTTGAGGAGTTGATGGGGAAGATGAGGGAGTTGTATGAAGGTGTTGCTGTGTTGAAGTATCAGCAACCTGATGAAGATCTTGATGCACTTGTATCTGTTGTTAATGACGATGATGTGGTTAACATGATGGAAGAGTATGATAAGTTAGGTTCGGGGGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATCCGAGCAAGATGGTTCGGCACACTTCATTGATGGGGATGATCCTGAGAGGAGGTATGTGGATGCGTTGAATAGTTTAAATGATGCTTCTGAGTTACGGAGGTTGCAACAGATGGAGTTTCCTATGATTGGTACCCTCGAGGATATCTGTGTGGCTGATCGGTTCATTAATCCTATTGCCGTGGAAAATGGGATTCATAGCCAGAGAAGTGGGGAACTAGCCATGTCACCATATAGTTTGCATCATATCCCTATCCAGCACCAGCAACCTATGGGTCAGAGGTATAATGAAATTGATGCTCAGTGGAATCCTGGTTATTATTCTCCTAGGCATCATGGTCAGTGTCACCATGACTCCAGATCATCATTGGTTGACTATCCATCTTCTCCATCTGGCACAAGGTACCATGCGCCATTCCCTGAGATGCCAGATAAGGGCATTGATAGAGTGCCAGATGAGTATGCTCGGCATCACGTAAATCACCATCCTTTATACGACAATCATCCACAGTATCCTGAAAACGTTGTGTGGCTGCCAACTGGAGCAACACATGGTGATAAGTCCGGTTTTCCAGCCAACCTTCATCATGGTTCTCATGCTCTTGAAGTGGAGCACTGTCGCATGGGTTTTCAGAGAGCTCAACCACATTTGGAGCATCCTAATATGCTTCCACCTGTTGCCATTCCATGTCCGGAATGCCCCTCAAGCAGGGATGCTCTCACAGTGAATGCTGATGGCAAGTTACAGCCTACAATGTATCCGAATGATACTCAGAATCATGAGAGAGGATGTGGTTTACAGCATCAGGGTTCTGGAAGAATGAGTGATCATTATGTTGGCGATGTTCCTATTATTAATTTCCCTCCTGGTCATGGTAGCATGATTGATGGACATGTTCTTCCTTCCAATCATGTTCATCAACAGGTTGGACCTGAATTGGGGGTTGAACTGTTCCCTGACCAAACCATGGCTGCTATACCGCATCTAAAACTTCCTTCGTTGGAAGAACGGAGTGTGCAGTATGGAAAGACATCTTCTCCTTATGGAGTAGATAATAATTACGCTGTGCCTTGTGGACATGCACCTGGTTATACTCTTTGGAGAAACGGTCCGACTCCAGTTCATATTGGATCACCACACGAGGCAACTACTCCACCTCAGCCGGTTGATGGTGTGATAAATACTGGAAGAATCAGGGGAGAGGGCAGTCCAGGTTTTTTTGTTGGACCAGATAGTCAAAATCTTTGGGTTGATTCGTCACAGAAATTTTCAGGTCATGATGGGCCAGCCATCCCCGAATACCCTTATGCAAATGCTTCGAAGTTGAATCCAATGATCACCTGTCAGGAAAATAAACACCCAATTATTTTAGATGCCATTCATCCTCCACAGGACGTAAACGCTAGTACCTGCTTGGAACCTGTGCAGCTGCAAAAATCTTCTCTTAATATGGTTCACAATAATGAGGTTTTAAAAATTGACTCTCATTTGACTGAAGTGATCAGTTTGCAATCTATAAGTTTGCTTGGAGAAGGAAAAAAAACAAAAAATAAGGATAATGTTGTTGCTTCTGTTGACTGTAAAAATTCATTTTCAAAACCCACATCAGAGTGTCGACATGTCGAAAAACTGAATGATAAGAACTGTTCTGCTCATGAAGATTCTAAGCATTTAGCTGATCAATTCAATATCTTGCCTGAGTTAATTGCTTCTGTTAAAAAGGCTGCATTAGAATGTCACGATGAGGTGAAACCTACACGTGAAGAACATGTCAATTGTCAGATTGATAATTCAAATACTAAAGAAGAAACAGCAAATGAAGTTGAACCAGTGAATGCTCATGGTGATTTAGAATTGGACACTGAAAACGACCATGTTGTTACTTCTAAAATCGAGCCTACTAAGGCCGAGGCAGAAGCAATTGCTAGGGGATTACAGACAATTAGAAATGATGATTTGGAGGAGGTCCGTGAGCTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAATGGAAAGGTTCCGATGTCGCCATTAAGAGAATAAAAGCCAGTTGTTTTTCTGGAAGACCATCAGAAAGAGCAAGATTGATTGCAGATTTTTGGAAGGAGGCATTAATGCTGAGTTCATTGCATCATCCGAATGTTGTATCCTTCTATGGCATTGTTCGTGATGGCCCTGATGGGTCTTTAGCAACAGTGACAGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAGGACAGAACAATAGATCGTCGGAAGAGGCTCATTATAGCCATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATAGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAACATGAGAGATCCACAACGACCTGTCTGCAAGATTGGTGATTTGGGTCTATCAAAGGTTAAGCAGCACACACTAGTGTCCGGAGGGGTACGCGGAACTTTACCTTGGATGGCACCTGAACTTCTTAGTGGGAAAAGCCATATGGTGTCAGAGAAGATCGATGTTTACTCTTTTGGGATAGTCATGTGGGAACTACTCACAGGGGATGAACCTTACGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACTTTACGTCCTCAAAGCCCAACATGGTGCGATCCCGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCCGATCCTATAGAAAGGCCATCATTTGCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATGTGAAATAG 3237 0.4285 MCNKGFQCLSESETIIDHRQHFIMMDSPTAVRSPATATTTGSGSNDDGRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVSRDISFEELMGKMRELYEGVAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQSEQDGSAHFIDGDDPERRYVDALNSLNDASELRRLQQMEFPMIGTLEDICVADRFINPIAVENGIHSQRSGELAMSPYSLHHIPIQHQQPMGQRYNEIDAQWNPGYYSPRHHGQCHHDSRSSLVDYPSSPSGTRYHAPFPEMPDKGIDRVPDEYARHHVNHHPLYDNHPQYPENVVWLPTGATHGDKSGFPANLHHGSHALEVEHCRMGFQRAQPHLEHPNMLPPVAIPCPECPSSRDALTVNADGKLQPTMYPNDTQNHERGCGLQHQGSGRMSDHYVGDVPIINFPPGHGSMIDGHVLPSNHVHQQVGPELGVELFPDQTMAAIPHLKLPSLEERSVQYGKTSSPYGVDNNYAVPCGHAPGYTLWRNGPTPVHIGSPHEATTPPQPVDGVINTGRIRGEGSPGFFVGPDSQNLWVDSSQKFSGHDGPAIPEYPYANASKLNPMITCQENKHPIILDAIHPPQDVNASTCLEPVQLQKSSLNMVHNNEVLKIDSHLTEVISLQSISLLGEGKKTKNKDNVVASVDCKNSFSKPTSECRHVEKLNDKNCSAHEDSKHLADQFNILPELIASVKKAALECHDEVKPTREEHVNCQIDNSNTKEETANEVEPVNAHGDLELDTENDHVVTSKIEPTKAEAEAIARGLQTIRNDDLEEVRELGSGTYGAVYHGKWKGSDVAIKRIKASCFSGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSHMVSEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNTLRPQSPTWCDPEWKSLMESCWASDPIERPSFAEISKKLRSMAASMNVK* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3308 1078 PANTHER - 30 1078 - -
Tpr2g3308 1078 SMART serkin_6 805 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3308 1078 CDD STKc_MAP3K-like 811 1068 - -
Tpr2g3308 1078 ProSiteProfiles Protein kinase domain profile. 805 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3308 1078 Gene3D Transferase(Phosphotransferase) domain 1 892 1078 - -
Tpr2g3308 1078 SUPERFAMILY Protein kinase-like (PK-like) 797 1066 IPR011009 -
Tpr2g3308 1078 PRINTS Tyrosine kinase catalytic domain signature 887 900 IPR001245 GO:0004672|GO:0006468
Tpr2g3308 1078 PRINTS Tyrosine kinase catalytic domain signature 924 942 IPR001245 GO:0004672|GO:0006468
Tpr2g3308 1078 PRINTS Tyrosine kinase catalytic domain signature 995 1017 IPR001245 GO:0004672|GO:0006468
Tpr2g3308 1078 PRINTS Tyrosine kinase catalytic domain signature 1039 1061 IPR001245 GO:0004672|GO:0006468
Tpr2g3308 1078 Gene3D Phosphorylase Kinase; domain 1 790 891 - -
Tpr2g3308 1078 Pfam PB1 domain 66 151 IPR000270 GO:0005515
Tpr2g3308 1078 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Tpr2g3308 1078 ProSitePatterns Protein kinases ATP-binding region signature. 811 832 IPR017441 GO:0005524
Tpr2g3308 1078 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 1078 - -
Tpr2g3308 1078 Gene3D - 69 153 - -
Tpr2g3308 1078 Pfam Protein tyrosine and serine/threonine kinase 806 1068 IPR001245 GO:0004672|GO:0006468
Tpr2g3308 1078 SMART PB1_new 65 150 IPR000270 GO:0005515
Tpr2g3308 1078 SUPERFAMILY CAD & PB1 domains 67 156 - -
Tpr2g3308 1078 CDD PB1_UP2 54 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3308 Tpr-Chr2 36723230 36728945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3308 45 1078 MAP Kinase Kinase Kinase AT5G57610 53.647 0.0 1018
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Tpr2g3308 PK_Tyr_Ser-Thr 2.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3308 - - gmx:100779077 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3308 2 36723230 36728945 Tpr2g3308 2 36723230 36728945 ECH