Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3299 ATGGTTTCAACAAAAAGTATAGGAAAGTATAGAGTTAGGGAGACCATAGGAGAAGGTACATTCTCTAAGGTTAAACTTGCTTTCAATAGTAGCAATGGTGAGAAGGTAGCAATCAAGGTCATTGACAAACAAATGGTCTTGAAAAACAATCTTAGGTATCAGGTACAAAGTGAGATTACAACAATGAAACTTCTAAATCATCCTAATATTGTTAGAATTCATGAGGTTATTGGCACAAAAACAAAAATATACATTGTGATGGAATATGTATCAGGAGGTCAACTATTGGACAAAATGTCCTATGCCAATAAGTTAGATGAATGTGAGGCAAGAAAATTATTCCAGCAACTTATTGACACGGTCGACTACTGCCATAATAAGGGGGTTTATCACCGCGATTTAAAGCCTGAAAATTTGCTGCTTGACAGCAAGGGAAACCTAAAAGTGTCTGATTTTGGATTAAGTGCATTGGCAAAGTTTGACGATGTTTTAAACACAAAGTGTGGATCCCCGTGCTACGTGGCTCCCGAGGTAAGATCGAGTGGAGGAGGAGAGTGTTTAGGAGTCCGAGGGAACATCTGGCAACAACAACATGCTAAAGAGATCCTCGGACTCCCCAACAGAAAGAGAGCAAGTCACGGCTTATACGGGATACATGTATTATTATTGATTTTGACCCTTATACTTCCTCATGAGCAGGTGCTGATGAACAAAGGGTATGATGGAGCAGCTGTTGATGTTTGGTCATGTGGTGTGATCCTTTTTGAGTTACTTGCTGGTTTTCTACCATTTGATGACCAGAATTTGATGGGTTTATACCATAAGATATGCAGAGCAGAATATACTTGCCCCCCGTGGTTTACTATAAGTCAAAAGAAACTAATTGCCAAAATACTTGAACCGCGTTCTGAAAAGCGGATAACTATTTCAGATATTATTGAAAATGAGTGGTTTAAAAAAGATTATCAACCTGTTCGCGCGTGTGAATTTGACACGATCATTAACTTGGATGAAGATAGTGCTGCTTTCGACTCAATTGAGGAGAAAACTACAAATTCAACGATAACCAAGTCCTCGAGCTTCATTAATGCATTTCAACTGATAGCCATGTTTCAGGACTTTGATCTATCGTCCCTTTTCGAAGAACAGGATCACAAGAAGCAGATAACAATGCTTGGATCACAACACACAATCACTGAAACAGTAGAAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCGGTAGAGAAAATGAACAACTTTAAGATGAAAATGCACCCGAAACTGTCAATGACTAGGTGTTCAAGATCATACTTTGACCTATCAGCTGAGGTGATAGAAGTTGCTCCAACTCATTGTGTTATACAAATATCAAAATCTGCAGGAGATCTAAGAATGTACAATAGATTTTGTGAAAGTTTATCAAGTCTGCTGAAAGAAAATTCTAACATGCCATCACAAGGCCCAGACTCTGTGGATCAATGCGACGCTGGCAGTATAGAAAAGCAAGATGCTGAATGTTATGAAAAGCCAAATAGTGAAGATATCCGTGGCTATAAATCTGCTTGA 1572 0.3874 MVSTKSIGKYRVRETIGEGTFSKVKLAFNSSNGEKVAIKVIDKQMVLKNNLRYQVQSEITTMKLLNHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKMSYANKLDECEARKLFQQLIDTVDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALAKFDDVLNTKCGSPCYVAPEVRSSGGGECLGVRGNIWQQQHAKEILGLPNRKRASHGLYGIHVLLLILTLILPHEQVLMNKGYDGAAVDVWSCGVILFELLAGFLPFDDQNLMGLYHKICRAEYTCPPWFTISQKKLIAKILEPRSEKRITISDIIENEWFKKDYQPVRACEFDTIINLDEDSAAFDSIEEKTTNSTITKSSSFINAFQLIAMFQDFDLSSLFEEQDHKKQITMLGSQHTITETVEKIEAAATDVRLSVEKMNNFKMKMHPKLSMTRCSRSYFDLSAEVIEVAPTHCVIQISKSAGDLRMYNRFCESLSSLLKENSNMPSQGPDSVDQCDAGSIEKQDAECYEKPNSEDIRGYKSA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3299 523 Pfam NAF domain 360 418 IPR004041 GO:0007165
Tpr2g3299 523 ProSiteProfiles Protein kinase domain profile. 10 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3299 523 Gene3D Kinase associated domain 1, KA1 357 482 - -
Tpr2g3299 523 SMART serkin_6 10 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3299 523 ProSiteProfiles NAF domain profile. 357 381 IPR018451 GO:0007165
Tpr2g3299 523 PANTHER SERINE/THREONINE KINASE 6 179 - -
Tpr2g3299 523 PANTHER SERINE/THREONINE KINASE 233 484 - -
Tpr2g3299 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Tpr2g3299 523 Gene3D Transferase(Phosphotransferase) domain 1 2 195 - -
Tpr2g3299 523 MobiDBLite consensus disorder prediction 504 523 - -
Tpr2g3299 523 Pfam Protein kinase domain 234 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3299 523 Pfam Protein kinase domain 10 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3299 523 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 179 - -
Tpr2g3299 523 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 233 484 - -
Tpr2g3299 523 SUPERFAMILY Protein kinase-like (PK-like) 7 343 IPR011009 -
Tpr2g3299 523 Gene3D Transferase(Phosphotransferase) domain 1 234 320 - -
Tpr2g3299 523 CDD CIPK_C 363 480 - -
Tpr2g3299 523 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3299 Tpr-Chr2 36657891 36661404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3299 87 479 CBL-interacting serine-threonine protein kinases AT5G57630 52.658 1.22e-122 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr2g3299 Pkinase 5.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3299 - - mtr:MTR_4g128820 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3299 2 36657891 36661404 Tpr2g3299 2 36657891 36661404 ECH