Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3295 ATGGAAGTTACTTCCTCTTCTAGAATACTAATTGGTCTCTCATTAGACCTAAATGATAGCAAGGAGCTTCTATCATGGGCAATAAGAGTTCTAGCTAATCCAAATGATACTATTGTTGCAGTGCATGTTCTTGTTGGTGAGAATATGAAGAAACATGTGTCAGTGAGAAGAAGACAATCACAACTTAGGCAAGCAAAAGCATATGTTATATCTGTGCTTGGAGAATTTGCACAGACTTGTTGGTCTAAACAGGTGAATTTGGAGGCAAAAGTGGCACTTAATTCCACAGTAGGTGGTGGTTTAGTGGAGGAAGCCAAGTCAATTTCTGCTGATTTTCTTCTCCTCCGGGGATCAAGAAACAAAACAAATAAAATTGGGACCTCTAAAGGAATTACCAAGTATTGCTTTGAGCATATAGATGAAGGTTGTACAATGATCTCAGTTGGTAGATACACAAAGTCAGAACAGAATTACATCAATTCAAATTCCACACATTTTCAAGAAATGACTGCACAACACAGTTCACCAAGAACAGTACTGCTAGATGGACTAGAGGGACAATCCAACAACAGCACAGAAGATGACACATTTAGCACTAGAGCATCAAGCATGACATATACACCTTCTTCTGATCCCAAGATTAAAAGAAAATCAAAGTTAAGAAAATCACAATTCTCATTCAGGTTCATAATATCATTCCTTGGTTCACCATTCAGAATAAAAAGCTTTAACATGTCCAAAATTGAAAAACATCAACCCTTGTTGAAGTGCTTCAGCTATGAAAACATATCAAATGCTACTGATGACTTTCACCAAGATAATTTGGTTGGAAGAGGAGGGTACTCAGAAGTATACAAAGGCGTTCTTTGTGATGGAGAAACCATTGCTGTGAAGAGATTAGCCAAAGACAACAATGATCCAAACAAGGAAAAAGAGTTCCTTATGGAGTTAGGTGTTATTGGACATGTCTGTCATGCTAATACTGCAACTTTGTTGGGCTATTGCATTGAAAATGGGCTTTATCTGATTTTCAATTACTCTCAAAATGGAAACTTGTCAACTGCATTGCATGGTTATGGTAAAGCAGAAAACTCACTTGACTGGCCAATAAGATACAAAATAGCTATTGGAGTTGCAAGGGGTCTTCATTATCTTCATACATGTTGTAAACATCGAATAATTCATCGCGACATTAAAGCCTCCAATGTTCTTCTTGGTCCTGATTATGAACCACAGATAACTGATTTTGGACTTGCAAAGTGGCTTCCTAACAAGTGGACTCATCATGCTGTAATCCCAGTGGAGGGAACATTTGGATATCTAGCACCAGAAGTCTTTATGCATGGTATTGTGGATGAGAAAACTGATATTTATGCATTTGGTGTTCTTCTTCTCGAGATTGTAACCGGACGCAAACCTGTTGATTCATCAAAGCAAAATATTCTCCTATGGGCAAAGCCTCTGATGGAATCAGGGAATATTGGTGAACTGGCTGATCCAAGAATGGAAGGTAGATATGATGCAGAGCAACTGTATAGGGTAATCCTAACTGCTTCATACTGTGTCAGACAAACTGCCATTTGGCGTCCTACAATGACCGAGGTGTTAGAGTTGCTAACTAGTGGCCAAGACTACGAAATTGGAAAGAGTTGGAGAATACCAAAGTTCACTTCTGATGAATTGGATGATTACTCTATGATTTTTGGATATGATGTCCCCTCAGACATATCGCTAGAGGATTATTTGTGA 1749 0.3842 MEVTSSSRILIGLSLDLNDSKELLSWAIRVLANPNDTIVAVHVLVGENMKKHVSVRRRQSQLRQAKAYVISVLGEFAQTCWSKQVNLEAKVALNSTVGGGLVEEAKSISADFLLLRGSRNKTNKIGTSKGITKYCFEHIDEGCTMISVGRYTKSEQNYINSNSTHFQEMTAQHSSPRTVLLDGLEGQSNNSTEDDTFSTRASSMTYTPSSDPKIKRKSKLRKSQFSFRFIISFLGSPFRIKSFNMSKIEKHQPLLKCFSYENISNATDDFHQDNLVGRGGYSEVYKGVLCDGETIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHANTATLLGYCIENGLYLIFNYSQNGNLSTALHGYGKAENSLDWPIRYKIAIGVARGLHYLHTCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPEVFMHGIVDEKTDIYAFGVLLLEIVTGRKPVDSSKQNILLWAKPLMESGNIGELADPRMEGRYDAEQLYRVILTASYCVRQTAIWRPTMTEVLELLTSGQDYEIGKSWRIPKFTSDELDDYSMIFGYDVPSDISLEDYL* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3295 582 Gene3D HUPs 2 139 IPR014729 -
Tpr2g3295 582 ProSitePatterns Protein kinases ATP-binding region signature. 276 298 IPR017441 GO:0005524
Tpr2g3295 582 PANTHER OS08G0249100 PROTEIN 7 572 - -
Tpr2g3295 582 Gene3D Transferase(Phosphotransferase) domain 1 348 550 - -
Tpr2g3295 582 MobiDBLite consensus disorder prediction 187 215 - -
Tpr2g3295 582 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 115 - -
Tpr2g3295 582 SMART serkin_6 270 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3295 582 MobiDBLite consensus disorder prediction 187 211 - -
Tpr2g3295 582 Gene3D Phosphorylase Kinase; domain 1 236 346 - -
Tpr2g3295 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 393 405 IPR008271 GO:0004672|GO:0006468
Tpr2g3295 582 PANTHER OS08G0249100 PROTEIN 7 572 - -
Tpr2g3295 582 Pfam Protein kinase domain 270 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3295 582 ProSiteProfiles Protein kinase domain profile. 270 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3295 582 SUPERFAMILY Protein kinase-like (PK-like) 244 539 IPR011009 -
Tpr2g3295 582 CDD USP_Like 8 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3295 Tpr-Chr2 36613425 36617807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3295 258 578 Trihelix Transcription Factor Family AT1G70460 39.528 4.44e-72 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr2g3295 Pkinase 7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3295 - - ccaj:109809416 967.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3295 2 36613425 36617807 Tpr2g3295 2 36613425 36617807 ECH