Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3294 ATGGGATCCTCCTTAAGTTGCTGTGGCTCAGAGAAGGTTGATGAAGTGCCATCATCATATGGTGCAGCTAACAATACGTGGAGAATATTCACATACAAGGAGTTGCATACAGCTACAAATGGGTTCAGTGATGATTATAAGCTTGGTGAAGGTGGGTTTGGGAGTGTTTATTGGGGAAGAACCAGTGATGGTCTCCAGATAGCAGTGAAGAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCTGTAGAAGTTGAAGTACTTGGAAGGGTTAGGCACAACAATTTATTGGGTCTTAGGGGATATTGTGTTGGCGATGATCAACGTCTTATTGTCTACGATTACATGCCAAATCTCAGTCTGCTTTCTCATCTCCATGGCCAATTTACTGGTGAAGTGCAACTCAACTGGCAAAGGAGAATGAGCATTGCAATTGGCTCTGCTGAAGGCATTTTGTACTTGCATCATCAAGTCACACCCCACATCATCCATAGGGACATAAAGGCAAGTAATGTTTTGCTTGATTCAGATTTTGTGCCTCTGGTTGCTGATTTTGGATTTGCAAAGCTTATCCCTGAAGGAGTAAGCCACATGACAACCCGTGTTAAGGGTACATTAGGATACTTGGCACCTGAGTATGCTATGTGGGGAAAAGTTTCTGAAAGTTGTGATGTCTATAGTTTTGGAATTCTTCTGCTAGAGCTAGTAACTGGTAGAAAGCCGATAGAGAAGTTACCTGGCGGGCTTAAGAGAACAATAACCGAATGGGCTGAGCCTTTGATAACCAAAGGAAGGTACAAGGATATGGTTGATCCAAAACTCAGAGGAAACTTTGATGAAAATCAAGTGAAACAAACAGTTAATGTCGCTGCTCTTTGCGTGCAAAGTGAACCTGAAAAACGACCAAACATGAAGCAAGTTGTTAGTCTTCTGAAAGGACAAGAACCTGATCAAGTGAAAGTGACTAAGATGAGATTAGATAGTGTCAAATATAATGATGAATTATTGGCACTTGATCAACCTAGTGATGACGATGATGATTTTGATGGAAATAGTAGCTACGGTGTTTTTAGTGCTATCGATGTTCAAAAGATGAATGATCCTTACAAGCGCGGTGATATCAAGAAAATTGGCTAA 1143 0.4103 MGSSLSCCGSEKVDEVPSSYGAANNTWRIFTYKELHTATNGFSDDYKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHNNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFTGEVQLNWQRRMSIAIGSAEGILYLHHQVTPHIIHRDIKASNVLLDSDFVPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGLKRTITEWAEPLITKGRYKDMVDPKLRGNFDENQVKQTVNVAALCVQSEPEKRPNMKQVVSLLKGQEPDQVKVTKMRLDSVKYNDELLALDQPSDDDDDFDGNSSYGVFSAIDVQKMNDPYKRGDIKKIG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3294 380 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Tpr2g3294 380 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 375 - -
Tpr2g3294 380 Pfam Protein tyrosine and serine/threonine kinase 47 313 IPR001245 GO:0004672|GO:0006468
Tpr2g3294 380 SUPERFAMILY Protein kinase-like (PK-like) 26 321 IPR011009 -
Tpr2g3294 380 Gene3D Transferase(Phosphotransferase) domain 1 118 331 - -
Tpr2g3294 380 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3294 380 PANTHER OS01G0750732 PROTEIN 1 375 - -
Tpr2g3294 380 CDD STKc_IRAK 48 315 - -
Tpr2g3294 380 Gene3D Phosphorylase Kinase; domain 1 15 117 - -
Tpr2g3294 380 ProSiteProfiles Protein kinase domain profile. 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3294 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3294 Tpr-Chr2 36602288 36605233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3294 30 366 Trihelix Transcription Factor Family AT1G70460 44.828 6.06e-93 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Tpr2g3294 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3294 - - gmx:100783365 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3294 2 36602288 36605233 Tpr2g3294 2 36602288 36605233 ECH