LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g3279	ATGCTTTCTAGATCTTGTTTAGGTTTACTAAATCATCAACTATCACTAAACAACAACAACGATGATGATTACGAAAACATAAACACCGTTCAACAACAATTCATCACAACGTTAAACCAACAACAACAACCCAATTTTCAACATTCAAACAACGTTCTTTCACTTCCTTCATCACCAATTTCTCGTAAACAAAGAATGATTATAGTATCAAACCAGTTACCAATACGCGTCGTTTCATCTTCTCACAACGATGAAAACTTCAAATTTGAATGGGATGTTGATAGCATAACGTTTCAGCTCAAAGAAGGTTTATCTTCTGATTCTGAAGTTTTTTACGTTGGTTCGTTGAAAACACAGATTGAAATTGAACCGTCACAACAAGAAGAAATTGCGAAAATTTTGTTACATGAATTTCGTTGTGTTCCAACTTTTTTACCTTCAGAAATTCACAGTGGATTCTACCATGGTTTCTGTAAGCATTATCTTTGGCCTCTGTTTCACTATATGGTTCCTGTAACGAAGAGTCAAGGTGCACGTTTTGATGATTCTCAGTGGCGTGCTTATGTTACTGCAAATAGAATCTTCGCCGACAAGGTACGAGAAGTTCTTAACGCTGATGAGGATTATGTTTGGGTTCATGATTATCATCTTATGATTTTGCCAACTTATTTGAGGAAACGTTTTCCTAAAGTCAAATTGGGTTTTTTTCTTCATAACACTTTTCCTACTTCGGAAATTTATAGAACAATCCCTGTTCGTGAGGATATTTTGAGGGGTTTGTTGAATTGTGATTTAATTGGGTTTCATACTTTTGATTATGCAAGACATTTTTTGTCTTGTTGTGGTAGAATGTTGGGTTTGGATTATGAGTCTAAAAGAGGTTACATTGGACTTGATTACTTTGGGAGAAATGTTACTATTAAGATTCTTCCTGTGGGGATTCACATGGGTCTTCTCGAATCGGTTTTGTCGTTGTCTGATACAGCTAAGAGGGTGAAGGAGTTGAAGGAAGAGTATGAAGGGAAAGATGTGATTTTGGGGGTTGATGATATGGATTTGTTTAAAGGTATTGGGTTGAAGTTTTTGGCATTGGGGAAGCTTTTGGAGGATAATGAAAAATTAAGGGGTCAAGTTGTGTTGGTTCAGATTCTGAATCAAGCGAGGAGTAGCGGAAAAGATATTCAGGATTTGAAGTTTGAGATTGAAGCGATTGCTAAAGAGGTTAACAATGAATATGGTGATGAACAATCTGGGTATAGGCCAATTGTTTGTATAAATGGACCGGTTTCGACTCAGGAAAAGGTTGCATACTATGCTATATCGGAATGTTGTATTGTGAATGCTGTGAGAGATGGGATGAATTTGATGCCTTATGAGTATACTGTTTGCAGACAAGGAAGTGCTAAATTGGACAAAGCACTTGAGGTGGAAAATGATGAGGCTAAAAAGAGTGTTATTATTGTTTCTGAGTTCATTGGTTGTTCGCCTTCGCTCAGCGGCGCAATTCGGGTGAATCCGTGGAACATTGACGATGTTTCTGAGAAGATTAACTCAGCACTCAAAATGACAGATTCCGAGAAGCAATTGCGGCACAAGAAGAATTATAAGTACATAAGCTCCCATGATGTAGCGTATTGGGCTAAGAGTTTTGATCAGGATTTAGAGAGAGCTTGTAGGGAGCATTATCTCAAAGTATATGTTGGATTCGGACTTGATCATTTTAGAATCATTGCTTTGGATCCTAGTTTTAAGAAGCTCTGTCTTGATGACATTGTCCCTGCTTACAGAGATACAAAGAGTAGATTGATCCTTTTGGATTATGATGGCACCATGATGCCTCAGGGATCAACAAACAAAGCTCCAAGTTCTGTTGTTATCAATCTCTTGAATTCCTTATGCAGTGATCCCAAAAATAAAGTGTTCATTGTTAGTGGCAGGGGTAGAGTTTGCCTTAGCGACTGGTTTTCTCCATGTGACAAATTGGGTCTCTCTGCAGAACATGGTTACTTCACTAGGTGGAGTAAGGATTCACATTGGACGACTTGCAGATTGGCATCAGATTTTGATTGGAAAATTAATGTAGAAAAGGTGATGTCGCTTTATACAGAAGCAACGGATGGTTCCTTCATTGAAGAAAAGGAAAGTGCAATGGTTTGGCAACATCAAGAAGCAGATCCTGATTTTGGACTGTGGCAAGCTAAAGAGCTTCTTGTTCACCTTGAGAGTATGCTGGCCAATGATCCTGTAGTAGTTAAAAGGGGACAGCATATTGTTGAAGTAAAGCCTCAGGGTGTGAGCAAAGGTAAAGTAGTGGAAGAGCTTATATCAACCATGAGGAATGAAGGGAAGTCACCAGATTTTCTGCTATGCATAGGAGATGATAGATCAGATGAAGATATGTTTGAAAGCATTGCTAATTTAGCTTTATCAACCATATCACAAGTTTTTGCATGCACTATTGGTTTTAAACCAAGCAGGGCTAAATACTATTTGGATGATACTGGTCATGTTATCAATCTGCTCGAAGGACTTGCCGCAACATCAGCAGCAGATTTAAGCACAGTGTAG	2568	0.3828	MLSRSCLGLLNHQLSLNNNNDDDYENINTVQQQFITTLNQQQQPNFQHSNNVLSLPSSPISRKQRMIIVSNQLPIRVVSSSHNDENFKFEWDVDSITFQLKEGLSSDSEVFYVGSLKTQIEIEPSQQEEIAKILLHEFRCVPTFLPSEIHSGFYHGFCKHYLWPLFHYMVPVTKSQGARFDDSQWRAYVTANRIFADKVREVLNADEDYVWVHDYHLMILPTYLRKRFPKVKLGFFLHNTFPTSEIYRTIPVREDILRGLLNCDLIGFHTFDYARHFLSCCGRMLGLDYESKRGYIGLDYFGRNVTIKILPVGIHMGLLESVLSLSDTAKRVKELKEEYEGKDVILGVDDMDLFKGIGLKFLALGKLLEDNEKLRGQVVLVQILNQARSSGKDIQDLKFEIEAIAKEVNNEYGDEQSGYRPIVCINGPVSTQEKVAYYAISECCIVNAVRDGMNLMPYEYTVCRQGSAKLDKALEVENDEAKKSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEKINSALKMTDSEKQLRHKKNYKYISSHDVAYWAKSFDQDLERACREHYLKVYVGFGLDHFRIIALDPSFKKLCLDDIVPAYRDTKSRLILLDYDGTMMPQGSTNKAPSSVVINLLNSLCSDPKNKVFIVSGRGRVCLSDWFSPCDKLGLSAEHGYFTRWSKDSHWTTCRLASDFDWKINVEKVMSLYTEATDGSFIEEKESAMVWQHQEADPDFGLWQAKELLVHLESMLANDPVVVKRGQHIVEVKPQGVSKGKVVEELISTMRNEGKSPDFLLCIGDDRSDEDMFESIANLALSTISQVFACTIGFKPSRAKYYLDDTGHVINLLEGLAATSAADLSTV*	856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g3279	855	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED	29	849	-	-
	Tpr2g3279	855	TIGRFAM	T6PP: trehalose-phosphatase	599	844	IPR003337	GO:0003824\|GO:0005992
	Tpr2g3279	855	Pfam	Glycosyltransferase family 20	65	555	IPR001830	GO:0003824\|GO:0005992
	Tpr2g3279	855	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	64	559	-	-
	Tpr2g3279	855	CDD	GT20_TPS	65	555	IPR001830	GO:0003824\|GO:0005992
	Tpr2g3279	855	Gene3D	-	600	717	IPR023214	-
	Tpr2g3279	855	Gene3D	-	731	853	IPR023214	-
	Tpr2g3279	855	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	29	849	IPR001830	GO:0003824\|GO:0005992
	Tpr2g3279	855	Gene3D	Glycogen Phosphorylase B;	328	540	-	-
	Tpr2g3279	855	Gene3D	Glycogen Phosphorylase B;	56	327	-	-
	Tpr2g3279	855	CDD	HAD_TPP	602	834	-	-
	Tpr2g3279	855	SUPERFAMILY	HAD-like	601	845	IPR036412	-
	Tpr2g3279	855	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	602	803	IPR006379	-
	Tpr2g3279	855	Pfam	Trehalose-phosphatase	604	833	IPR003337	GO:0003824\|GO:0005992

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g3279	Tpr-Chr2	36445842	36449366	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g3279	63	848	Trehalose Biosynthesis Gene Families	AT2G18700	65.912	0.0	1097

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g3279	K16055		-	gmx:100810498	1224.54