Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3248 ATGTTTACTATGCCTCTCAAAGTTCATCTTCTCTTCTTCTTCCTCTTCCTCTCTCTAGAGTATCTCTCTTCCGCTTCATTGCCTCGTAACCCCGAAGTGGAAGCTTTGATGAGTATTAAAGAAAGTTTAAATGATCCACATGGTGTATTAAGCAACTGGGATGAATTCTCTGTTGACCCTTGTAGTTGGCCCATGATTACTTGCTCTTCTGATTACCAAGTTATTGGATTTGGTGCTCCTAGTCAAAATCTCTCTGGAACTTTGTCTTCAGCAATTGGAAATTTAACAAATCTCAAACAAGTGTTACTGCAGAATAACAACATCTCAGGCAAAATACCATCAGAAATTGGAAACCTTCCCAAGCTTCAGACTTTAGATCTTTCAAATAACAGATTTTCTGCTTTGATTCCACCTTCTCTCAGTCAATTGAATAGTCTTCAGTACCTGAGGCTGAACAACAATAGCTTATCTGGACCTTTTCCTGTTTCACTGGCAAAAATCACACAACTTGCATTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGGTCATTCAATATTGTGGGGAACCCATTAATTTGTCTAAGCATCTCTATTGAAGGCTGTTCTGGATCAGTGACCCTTATGCCTGTTTCTTTCTCCCAAGTCTCATCAGAAGGAAAACACAAATCCAAAGAACTAGCAATTGCTCTTGGGGTCAGCTTTAGTTTTGTTTCTCTTGTGATCCTGTTTTTGGGGCTCTGTTGGTATAGAAAGAAAAGACAGCATGGAGCCATCTTGTATATTGGTGATTATAAAGAAGAGGCAGTTGTTAGCTTAGGAAATCTCAAAAATTTCGGTTTCAGAGAGCTCCAACATTCAACGGATAATTTCAGTTCCAAGAACATACTTGGTGCTGGGGGTTTTGGCAATGTTTATAGAGGGAAGCTTGGAGATGGCACAATGGTAGCGGTGAAAAGGCTGAAAGATGTAAACGGTAGTGCTGGTGAGTTACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTTCTAGTAACGAAAAACTTCTTGTTTATCCTTACATGTCTAATGGCAGTGTGGCCTCCAGGCTTAGAGGAAAACCAGCTTTAGATTGGAATGCAAGAAAGAGGATAGCAATTGGAGCTGCAAGGGGACTTTTGTATCTTCATGAACAATGTGATCCAAAGATAATACATAGAGATGTAAAGGCTGCCAATGTGCTTCTTGACGACGACTATGAGGCTATCGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCCCATGTTACCACTGCTGTCCGTGGTACTGTTGGGCACATTGCTCCGGAGTACCTCTCGACTGGCCAATCATCTGAGAAAACTGATGTGTATGGATTCGGCATTCTCTTGTTAGAACTTATAACTGGAATGACAGCTCTTGAGTTTGGGAAAACCTTGAATCAAAAAGGTGCTATGCTTGAATGGGTTAGGAAAATACAGCAAGAAAAGAAGGTTGAAGTGTTGGTGGACAAAGAACTAGGGAGCAACTATGATAGAATTGAGGTTGGGGAGATGCTGCAAGTAGCTTTACTTTGTACTCAATATTTGACAGCTCACCGTCCGAAAATGTCGGAAGTGGTCCGAATGCTTGAAGGAGATGGTCTTGCTGAGAAGTGGGCATCAACACATAATTATGGTAGCAATTGCTGGAGCCATAGTCACAGCAACAGTAGTAGCAATAGCTCATCTCGTCCTACCTCTACTTCAAAACATGATGACAATAATGTTCATGATCGTTCTGTCATGTTTGGCATGACATTGGATGATGATGATGATCAGTCTTTGGATTCCTATGCTATGGAACTTTCTGGTCCTAGATAA 1932 0.412 MFTMPLKVHLLFFFLFLSLEYLSSASLPRNPEVEALMSIKESLNDPHGVLSNWDEFSVDPCSWPMITCSSDYQVIGFGAPSQNLSGTLSSAIGNLTNLKQVLLQNNNISGKIPSEIGNLPKLQTLDLSNNRFSALIPPSLSQLNSLQYLRLNNNSLSGPFPVSLAKITQLAFLDLSYNNLSGPLPKFPARSFNIVGNPLICLSISIEGCSGSVTLMPVSFSQVSSEGKHKSKELAIALGVSFSFVSLVILFLGLCWYRKKRQHGAILYIGDYKEEAVVSLGNLKNFGFRELQHSTDNFSSKNILGAGGFGNVYRGKLGDGTMVAVKRLKDVNGSAGELQFQTELEMISLAVHRNLLRLIGYCASSNEKLLVYPYMSNGSVASRLRGKPALDWNARKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDDYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVYGFGILLLELITGMTALEFGKTLNQKGAMLEWVRKIQQEKKVEVLVDKELGSNYDRIEVGEMLQVALLCTQYLTAHRPKMSEVVRMLEGDGLAEKWASTHNYGSNCWSHSHSNSSSNSSSRPTSTSKHDDNNVHDRSVMFGMTLDDDDDQSLDSYAMELSGPR* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3248 643 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Tpr2g3248 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 417 429 IPR008271 GO:0004672|GO:0006468
Tpr2g3248 643 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Tpr2g3248 643 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Tpr2g3248 643 SUPERFAMILY Protein kinase-like (PK-like) 281 568 IPR011009 -
Tpr2g3248 643 MobiDBLite consensus disorder prediction 592 606 - -
Tpr2g3248 643 SMART serkin_6 298 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3248 643 Gene3D Phosphorylase Kinase; domain 1 269 374 - -
Tpr2g3248 643 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 643 - -
Tpr2g3248 643 ProSiteProfiles Protein kinase domain profile. 298 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3248 643 MobiDBLite consensus disorder prediction 592 643 - -
Tpr2g3248 643 ProSiteProfiles Leucine-rich repeat profile. 121 144 IPR001611 GO:0005515
Tpr2g3248 643 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Tpr2g3248 643 PRINTS Leucine-rich repeat signature 122 135 - -
Tpr2g3248 643 PRINTS Leucine-rich repeat signature 167 180 - -
Tpr2g3248 643 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 9 643 - -
Tpr2g3248 643 MobiDBLite consensus disorder prediction 607 623 - -
Tpr2g3248 643 Gene3D Transferase(Phosphotransferase) domain 1 375 585 - -
Tpr2g3248 643 Pfam Protein tyrosine and serine/threonine kinase 301 567 IPR001245 GO:0004672|GO:0006468
Tpr2g3248 643 SUPERFAMILY L domain-like 30 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3248 Tpr-Chr2 36201047 36205472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3248 13 643 Receptor kinase-like Gene Family AT5G16000 63.313 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Tpr2g3248 PK_Tyr_Ser-Thr 6.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3248 - - gmx:100797186 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3248 2 36201047 36205472 Tpr2g3248 2 36201047 36205472 ECH