Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g3247 | ATGGCGAAAAAATCGCAGAAGCAAATCGAGAAAGACAACGATAACAATAATCTAAATGCAAGTAACACGGTTACTACTAAGGCAAAACGGACTAGGAAAAGTGTTCCGAGAACTAGTCCACCTCAACGTAGCTCAATATATAGAGGTGTCACTAGGCATCGGTGGACAGGTCGATATGAAGCTCATTTGTGGGATAAGAATTGTTGGAATGAGTCTCAAAACAAGAAAGGAAGACAAGTGTATCTTGGTGCCTATGATAATGAAGAGACTGCAGCACATGCTTATGATCTAGCAGCATTGAAATATTGGGGTCAAGATACCATAATTAATTTTCCGTTATCAAACTATCAGAAAGAATTGATTGACATGGAGAGTCAATCAAGGGAGGAATATATTGGATCCTTAAGAAGGAAAAGCAGTGGTTTTTCGAGGGGAGTTTCTAAATATAGAGGTGTTGCAAGACATCATCATAATGGAAGGTGGGAGGCTAGGATTGGCAAAGTTTTTGGCAATAAGTATCTTTATCTTGGAACCTATGCCACACAAGAAGAAGCAGCTACTGCTTATGACATGGCAGCTATTGAATATCGTGGACTTAATGCTGTTACCAATTTTGATCTAAGCCGTTATATTAAGTGGCTTAAGCCCAACAACAACAACAATGATAATAACAAGTCCAATACTAATCCTTGTGACATTAACACTAATTATAGTACTAACGACCAAAACTCTAATGAAGAATTGGAATTTAGCATCCTAGACAATGAGACATTATCACTCAATAATTCTATTGATGAAGCCACATTGGTTCAACCTCGACCAACTAGTGCCACGTCAGCCCTAGAGCTTCTACTTCAATCATCTAAGTTTAAGGAAATGGTGGAAATGGCATCTATGACATCCAATGTGTCAACAACATTGGAGTCTGATCAATTGTCACAATGCTCATTTCCTGATGATATTCAAACTTACTTTGAATATGAAGATTTTAATGATGGTACCATGTTGGATGACCTCAACTCCATTGTGCCTATGTTCCACTTTGAAGGTGCTGAGATTTTATAA | 1065 | 0.3793 | MAKKSQKQIEKDNDNNNLNASNTVTTKAKRTRKSVPRTSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDNEETAAHAYDLAALKYWGQDTIINFPLSNYQKELIDMESQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGKVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNNNDNNKSNTNPCDINTNYSTNDQNSNEELEFSILDNETLSLNNSIDEATLVQPRPTSATSALELLLQSSKFKEMVEMASMTSNVSTTLESDQLSQCSFPDDIQTYFEYEDFNDGTMLDDLNSIVPMFHFEGAEIL* | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g3247 | 354 | CDD | AP2 | 147 | 208 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | Gene3D | AP2/ERF domain | 147 | 208 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | Gene3D | AP2/ERF domain | 46 | 114 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | ProSiteProfiles | AP2/ERF domain profile. | 46 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | ProSiteProfiles | AP2/ERF domain profile. | 148 | 206 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | SUPERFAMILY | DNA-binding domain | 147 | 208 | IPR016177 | GO:0003677 | |
Tpr2g3247 | 354 | Pfam | AP2 domain | 46 | 104 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | Pfam | AP2 domain | 147 | 198 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | PRINTS | Ethylene responsive element binding protein signature | 47 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | PRINTS | Ethylene responsive element binding protein signature | 188 | 208 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | SUPERFAMILY | DNA-binding domain | 45 | 114 | IPR016177 | GO:0003677 | |
Tpr2g3247 | 354 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 332 | - | - | |
Tpr2g3247 | 354 | SMART | rav1_2 | 46 | 118 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | SMART | rav1_2 | 148 | 212 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr2g3247 | 354 | MobiDBLite | consensus disorder prediction | 12 | 29 | - | - | |
Tpr2g3247 | 354 | PANTHER | AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 1 | 332 | - | - | |
Tpr2g3247 | 354 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Tpr2g3247 | 354 | CDD | AP2 | 45 | 114 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g3247 | Tpr-Chr2 | 36167932 | 36171016 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g3247 | 42 | 210 | AP2-EREBP Transcription Factor Family | AT5G57390 | 72.781 | 3.79e-91 | 278 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Tpr2g3247 | AP2 | 4.4e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g3247 | K09285 | - | gmx:100793339 | 510.76 |