Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3228 ATGCAGCAAGGTGATCAAACGGTTCTTAGCTTGAGGCCTGGTGGTGGTCGAGGAAACAGGCTTCTCGCTCCTAGATTTGATTCTTCCTCTTCAAACTCATCGGTTAATCCTTCTTTTGGTTCTTTTTCATCTGATCTTTCTCTGCTTCGTCCTCATGGTGCTGCTTCTTCTCACTTTGCTTTTAAGGTTGGAGATTCGCAGTTTGAAGGTCGTGAGCGTGTGCGATATACCAAAGAAGAGCTTTTAAAGATTAAAGAGACTGTTGAGGAGACCCCTGGTGATATTTTAAAGCTCAGACATGATATTGATGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGTCGTGTAGAAAATAACCCCCCAGCTCAAATTCAAAATCGATATTCTGAACCAGATAACCGTGACTGGCGTGGCCGAACTCCCCAACTTCAGGCAAACGCAGATGAGAGGTCTTGGGATAATCTCAAGGACAGAGAACCTGGCAATACTATTCAGGCTATTCGTCCAGATAAACAGAACCAAGGGGGAGGACCTGCGCCTACTCTAGTCAAGGCTGATCAACCATGGTCTGCTAGAAGGGGAAGTCTGTCTGACAAGGATCGTGTCTTAAAGACTGTTAAAGGGATACTAAACAAGTTGACTCCTGAGAAATTTGATCTTCTGAAGGGTCAGTTGATCGATTCTGGAATTACATCAGCTGATATATTGAAGGGAGTCATTTCATTGATATTTGATAAGGCAGTGCTAGAACCAACATTCTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGAACCTGATGGGAAAGAAATAACTTTTAAGAGAGTACTCTTGAATAACTGCCAGGAAGCTTTTGAAGGTGCTGGTAAACTGAGGGAAGAATTGGCGCAGATGACTTCCCCTGAGCAGGAGTCGGAGCGACGTGACAAGGAAAGACTTGTCAAAATTCGTACCCTAGGAAATATTCGTTTAATCGGTGAGCTGCTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTGGGACCTTCTGACAGCAAGGTCTGTCCGGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAACACTATTGGCAAGCAGCTTGATGAAAGCCCAAAATCACGACGTATAAATGATATGTACTTTAAACGGTTGAAAGAATTGAGCACCAATCCTCAACTTGTACTGCGGATGAGATTCATGGTTCGTGATGTCATAGATTTGCGTGCTAGTAACTGGATTCCAAGACGGGAAGAGGTTAAGGCCAAAACCATCAGTGAAATCCATAAGGAGGCAGAAAATAATCTTGGGTTGCGTCCAGGTGCCACTGCAGGTATGAGAAACAACCGTGTTTCTGGTGTTCAAGGTAATGCGGCTGTTGGGGGCTTTCCCATTACCCGACCTGGTACAGGAGGTTTAATGCCTGGGATGCCGGGTACCAGGAAGATGCCTGGGATGCCGGGTATTGATAATGATAACTGGGAGGTGCCTAGAACTAGATCTATGCCAAGAGGAGACATGTCCGTCTCACAAGTTGGAGGACGTGGGCAGTCTCCTTTCCTTTCCAAGCCATCAGCTCTAAACTCAAAGTTACTGCCTCAAGGTAGTAGTGGTCTCATAAGTGGGAAGAATAGTGCCCTGGTGCACGGAGGTGGCACTCCTGCTCGTCCATCAGACTTTGCTTCAGGTACTGAGCCTGCACCTCAAATCCCTTCCCCTGTTAAACCTGTTTCTGCCGTATCCCCTGAGAAGCCTCAGGACTCAGCTGCATTGAAGAATATTGATGATCTTCACCGCAAAACTGTCTCTCTTCTGGAAGAATATTTCAATATTCGGATGTTGGACGAGGCATTGATGTGTGTGGAGGAGCTAAAAGCTCCTCCAACTTATTACCCAGAGGTTGTCAAGGAAGCCATTTCCCTTGGACTAGAAAAAAATCCACCATGTGTTGAACCTGTTGCCAAACTTATTGAGTATCTGTTTACCAAGAAGATTCTCTCAGCTAGAGACATAGGGACTGGATGTTTGTTATTTGCTTCTCTGATTGATGATATTAGCATTGATTTACCTAAAGCACCAAGTAACTTTGGTGAGATAATAGGGAAACTAGTTTCGGCTGGGGGTTTAGACTTTAAGGTGGTGAGAGAGATTCTTAAGAAGGTGGGTGATGACTACTTCCAGAAAGCAATATTCAACTCTGCAGTGCAGTCAACCGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCAGTCTCTGTTCGAATGA 2328 0.4485 MQQGDQTVLSLRPGGGRGNRLLAPRFDSSSSNSSVNPSFGSFSSDLSLLRPHGAASSHFAFKVGDSQFEGRERVRYTKEELLKIKETVEETPGDILKLRHDIDAELFGEDQSWGRVENNPPAQIQNRYSEPDNRDWRGRTPQLQANADERSWDNLKDREPGNTIQAIRPDKQNQGGGPAPTLVKADQPWSARRGSLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGAGKLREELAQMTSPEQESERRDKERLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPSDSKVCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFKRLKELSTNPQLVLRMRFMVRDVIDLRASNWIPRREEVKAKTISEIHKEAENNLGLRPGATAGMRNNRVSGVQGNAAVGGFPITRPGTGGLMPGMPGTRKMPGMPGIDNDNWEVPRTRSMPRGDMSVSQVGGRGQSPFLSKPSALNSKLLPQGSSGLISGKNSALVHGGGTPARPSDFASGTEPAPQIPSPVKPVSAVSPEKPQDSAALKNIDDLHRKTVSLLEEYFNIRMLDEALMCVEELKAPPTYYPEVVKEAISLGLEKNPPCVEPVAKLIEYLFTKKILSARDIGTGCLLFASLIDDISIDLPKAPSNFGEIIGKLVSAGGLDFKVVREILKKVGDDYFQKAIFNSAVQSTGQAVLDSQASDIEACQSLFE* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3228 775 MobiDBLite consensus disorder prediction 1 35 - -
Tpr2g3228 775 Gene3D - 610 769 - -
Tpr2g3228 775 SUPERFAMILY ARM repeat 197 431 IPR016024 -
Tpr2g3228 775 SUPERFAMILY ARM repeat 612 754 IPR016024 -
Tpr2g3228 775 Pfam MIF4G domain 203 429 IPR003890 GO:0003723|GO:0005515
Tpr2g3228 775 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 774 - -
Tpr2g3228 775 ProSiteProfiles MI domain profile. 613 736 IPR003891 -
Tpr2g3228 775 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 774 IPR045208 GO:0003743
Tpr2g3228 775 SMART ma3_7 614 727 IPR003891 -
Tpr2g3228 775 MobiDBLite consensus disorder prediction 513 534 - -
Tpr2g3228 775 MobiDBLite consensus disorder prediction 167 196 - -
Tpr2g3228 775 Pfam MA3 domain 615 727 IPR003891 -
Tpr2g3228 775 MobiDBLite consensus disorder prediction 567 596 - -
Tpr2g3228 775 Gene3D - 195 430 - -
Tpr2g3228 775 SMART if4_15 203 429 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3228 Tpr-Chr2 36039970 36046587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3228 1 773 Eukaryotic Initiation Factors Gene Family AT5G57870 62.295 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3228 K03260 - gmx:100781275 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3228 2 36039970 36046587 Tpr2g3228 2 36039970 36046587 ECH