Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3225 ATGCCTTCACGTTGTGAAATTTGCTGTGAGATTCTCATCGCTGTCTTGCTCCCTCCATTAGGTGTTTGTCTCCGCCATGGTTGCTGCACTGTTGAATTCATCATTTGCTTGCTCCTTACAATACTAGGGTATATTCCTGGTATAATCTATGCTCTCTATGCAATTATCTTTATTGATCGTGATCAGTACTTTGATGAATATAGGCGTCCTTTGTATGCACAATCACAATACTAG 234 0.4017 MPSRCEICCEILIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAIIFIDRDQYFDEYRRPLYAQSQY* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3225 77 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
Tpr2g3225 77 PANTHER BNAA03G50460D PROTEIN 1 73 - -
Tpr2g3225 77 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 73 IPR000612 GO:0016021
Tpr2g3225 77 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3225 Tpr-Chr2 36014815 36015531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3225 1 75 RCI2 Gene Family AT4G28088 78.947 2.57e-41 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3225 - - gmx:100306426 152.91