Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3217 ATGAAAATTATGGTTTCTTCTTCTTCAATATTGTTGATTACCATTTTCTCAATTGGGCTTCTAATTTCATGCTCCGAATCCAAAGAATATATAGTTGGAGACGGTAAAAAATCATGGAGGTTTCCTCTTCCATCATTTCATGCATTCACCAACTGGGCCTCTACTCATCACCAATTCACAATTGGCGATACAATCGTGTTTGAGTACGATAGAACTAAAGAATCGGTGCATGAAGTTGATGAGCATGACTATATAAAGTGTAATACAAGGGGACATAATAACGACAGGTACTACGGCGGTAATACAAAGATAGTGCTTGATAGATTAGGAGTAAGATATTTCATAAGTGGAAGAAAGGGTCATTGCAAAATGGGATTAAAGGTAGCGGTCATAACTGTAATGCCTTCGTCTTCTCCTCCGTCACCTTCACCATCGCCATGA 441 0.3855 MKIMVSSSSILLITIFSIGLLISCSESKEYIVGDGKKSWRFPLPSFHAFTNWASTHHQFTIGDTIVFEYDRTKESVHEVDEHDYIKCNTRGHNNDRYYGGNTKIVLDRLGVRYFISGRKGHCKMGLKVAVITVMPSSSPPSPSPSP* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3217 146 CDD Phytocyanin 28 130 - -
Tpr2g3217 146 Pfam Plastocyanin-like domain 47 125 IPR003245 GO:0009055
Tpr2g3217 146 PANTHER BLUE COPPER PROTEIN 15 135 IPR039391 GO:0009055
Tpr2g3217 146 PANTHER EARLY NODULIN-55-2 15 135 - -
Tpr2g3217 146 Gene3D - 25 134 IPR008972 -
Tpr2g3217 146 SUPERFAMILY Cupredoxins 26 132 IPR008972 -
Tpr2g3217 146 ProSiteProfiles Phytocyanin domain profile. 28 134 IPR003245 GO:0009055
Tpr2g3217 146 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3217 Tpr-Chr2 35966082 35966918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3217 13 146 Phytocyanin Superfamily AT2G25060 41.791 2.19e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3217 - - mtr:MTR_4g130800 134.035