LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g3212	ATGGCTGAGCATCGAGTCACCGAAGCTCTCCCAAAAGAAAATTGTTCGGAAACTAACGATGAACAAAAAACTCAAGAGATAAAAAAGGAACGAGTCACTGAATCACCGCCTGCCACCGAGTCGAAGAAAGACGATTTACCTAGTTCTATTGAACAACCGATTGAGCACAATTCAGAAACCCTAATTGCTTTTCCATCTCCGGTTTTGCAGAATCAAAGTTTCGTCGCAGATTTGCAAGGGAGCCCTAATACGATGAATTCGAGCGTTAAAGCTGAAAATAAGGAAACGGTTGGACCTCCTGAAAAGGAAATTACTGCAAGACAAGAAGCCCAAACACCTCCAACTCAGACTGGAAATCAGCTTCCATCGACTGTGTTTTCACCTCCAAATTCTGTTACAAACTCTTTATCATCTGTTCCTAGTCCAACCATAGGAATAGAGAAAATTTCTACTCCAAATGTTAGTAACATGCTTGTGCCAGCAGGCAAAAAAAATCTTTCTGGTGCTAAACCCTTATCTTCTGTTACTGTTCCAAGGACACCATCATCTGATGGATACAACTGGCGGAAATATGGTCAGAAGCAAGTTAAGAGTCCTACTACAAGTTCTCGAAGCTATTACAGGTGTACTCAATCAAACTGTTGTGCTAAGAAGATTGAATGCTGGGATCATTCAGGTCATGTGATAGAGACTGTTTATAGAAGTGAGCACAGTCATGATCCCCCACGGAAGATAAATTCTGTTAGGGAAAGCAAGTTAGCACCTTCTATTGAACCTACTGCACAGAACAGTGTTTTAGTTAAGCCCGTCAATGTTCTGAAAGAATCCGACCCATCCACATCTTCCAAAGCTCAAGAAGAAGCACCTTGTGGTACTGACAAGAAACCACAAAACTCATCAAATATCAATGGTAATGGTAAAGTTATTTTGAAGGAGGAACATCTTGACGAGCCAGAGCCAAAGCGAAGAAAGGAGAAAGACGACTTAATTCACTCAGATTCTCCCGTAAATCCTGGAAAGAAACCCAAGTATGTTGTACATGCAGCAGGAGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAATATGGACAAAAAATGGTGAAGGGTAATCCACATCCCAGAAACTACTATAGATGCACTTCTGCTGGATGTCCTGTCCGGAAGCACATTGAGACTGCTGTAGACAACTCAGATGCTGTCATCATAACTTACAAGGGTGTACATGATCATGACACTCCTGTGCCCAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCCGCAGCAGCACCTGTCTCCATGAACAATTTGCAGTTGACTAAACCGGACTCGCCACAAAACGAGAAAGTTTCTACTAAGTGGTCAGTAGGCAAAGAAGGAGAACTAACTGGGGAAGCCATGGAACTAGGGGGTGAGAAAGCAATAGAATCGGCTAAAACCCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA	1485	0.431	MAEHRVTEALPKENCSETNDEQKTQEIKKERVTESPPATESKKDDLPSSIEQPIEHNSETLIAFPSPVLQNQSFVADLQGSPNTMNSSVKAENKETVGPPEKEITARQEAQTPPTQTGNQLPSTVFSPPNSVTNSLSSVPSPTIGIEKISTPNVSNMLVPAGKKNLSGAKPLSSVTVPRTPSSDGYNWRKYGQKQVKSPTTSSRSYYRCTQSNCCAKKIECWDHSGHVIETVYRSEHSHDPPRKINSVRESKLAPSIEPTAQNSVLVKPVNVLKESDPSTSSKAQEEAPCGTDKKPQNSSNINGNGKVILKEEHLDEPEPKRRKEKDDLIHSDSPVNPGKKPKYVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSDAVIITYKGVHDHDTPVPKKRHGPPSAPLVAAAAPVSMNNLQLTKPDSPQNEKVSTKWSVGKEGELTGEAMELGGEKAIESAKTLLSIGFEIKPC*	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	273	306	-	-
	Tpr2g3212	494	Pfam	WRKY DNA -binding domain	357	412	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	Pfam	WRKY DNA -binding domain	184	239	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	Gene3D	WRKY domain	172	243	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	Gene3D	WRKY domain	340	416	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	63	93	-	-
	Tpr2g3212	494	SUPERFAMILY	WRKY DNA-binding domain	351	415	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	309	334	-	-
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	1	50	-	-
	Tpr2g3212	494	SUPERFAMILY	WRKY DNA-binding domain	177	242	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	1	120	-	-
	Tpr2g3212	494	ProSiteProfiles	WRKY domain profile.	183	242	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	ProSiteProfiles	WRKY domain profile.	350	415	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	19	492	IPR044810	GO:0003700
	Tpr2g3212	494	MobiDBLite	consensus disorder prediction	273	341	-	-
	Tpr2g3212	494	PANTHER	WRKY TRANSCRIPTION FACTOR 32-RELATED	19	492	-	-
	Tpr2g3212	494	SMART	WRKY_cls	182	241	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Tpr2g3212	494	SMART	WRKY_cls	355	414	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g3212	Tpr-Chr2	35926325	35931293	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g3212	172	494	WRKY Transcription Factor Family	AT4G30935	60.429	1.99e-127	377

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Tpr2g3212		WRKY	2.3e-23	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g3212	-		-	gmx:100127377	639.032

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr2g3212	2	35926325	35931293	Tpr2g3212	2	35926325	35931293	ECH