Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3202 ATGCAACCTTGCAGCAGAGAAATGCAATCCCTCAACTCCCTCTTCAACTCTTCTTCTTCTTCCGAAATTCCAATTCCACAACTCCAAAATCACTCACAGATCCAAATCAACAACAACAACGACGCATTCCATAACGACGATTTTCTCAAACAAATGCTCTCCAATCTCCCTCCATCTTCTCCATGGACTCTAGACCCTAACAATCCTAAACCCTTATGGGACCCTAATTCCGACGAAAATGTCACTTTCCCTAATTACGAAGAACAACACAACAACCTTTCATCCAAATTTCGTAACCACCAGATCACTGACAAGTCCGCCGCTGCTCTCATGCTTCTCATGCCTACTGCCGCCGATTCCGGACTTCTCCACATGCCTGCTGACTTTGACTCCTCTCAAAACGATGTCGTTAACGCTTCCTCCCTTTTACAGGCTGGTGACGGTTCCGTTCAAGCTCTCTTCAACGGTTTTTCCGGATCTCTCCATGGTGTCGCCGCCAATCAAACTCATCATTTTCAACCTCCTCAGGGACAGAGTTTTGGAGGTGGTTCAGTGAGTGCAACGAACCAAGCTCCGGCCAGCGGTGCTCCGGCTCAGCCAAGGCAGAAAGTCAGGGCTAGGAGAGGTCAAGCAACCGATCCACACAGCATTGCTGAGAGATTGCGGAGGGAAAGAATTGCTGAGAGAATGAAAGCATTGCAAGAACTTGTTCCTAATGCCAACAAGACAGACAAGGCCTCCATGCTGGATGAGATCATCGATTATGTGAAGTTCCTACAGGTTCAAGTCAAGGTTTTGAGTATGAGCAGATTAGGTGGAGCGGCAGCTGTAGCTCCCCTTGTTGCTGATATGTCCTCCGAGGGTGTGAGTGACTGCGTCCAAACCAACGGCAGCGGTGGGGTCCACCCCAGAAACCCTAAAACGGCGTCGTCTTCAAACGAAAGCCTCACAATGACAGAACATCAGGTTGCAAAGCTAATGGAAGAAGACATGGGATCAGCCATGCAATATTTGCAAGGCAAAGGTCTATGCCTTATGCCTATTTCTCTTGCAACTGCAATATCCACCGCCACGTGTCACACTAGGAACCCTTTGATCAATGCTGCTAATAACAATGTTAACAACGGTAATGGGAACCATGTTGTTGCATCTAACGGTGATGGGCCATCCTCTCCTGGAATGTCCGTTAATAGCATTGTCAAAGATGCTAACTCTGCTTCAAAATCGTAG 1230 0.478 MQPCSREMQSLNSLFNSSSSSEIPIPQLQNHSQIQINNNNDAFHNDDFLKQMLSNLPPSSPWTLDPNNPKPLWDPNSDENVTFPNYEEQHNNLSSKFRNHQITDKSAAALMLLMPTAADSGLLHMPADFDSSQNDVVNASSLLQAGDGSVQALFNGFSGSLHGVAANQTHHFQPPQGQSFGGGSVSATNQAPASGAPAQPRQKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQVQVKVLSMSRLGGAAAVAPLVADMSSEGVSDCVQTNGSGGVHPRNPKTASSSNESLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHTRNPLINAANNNVNNGNGNHVVASNGDGPSSPGMSVNSIVKDANSASKS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3202 409 MobiDBLite consensus disorder prediction 296 316 - -
Tpr2g3202 409 MobiDBLite consensus disorder prediction 206 220 - -
Tpr2g3202 409 Pfam Helix-loop-helix DNA-binding domain 215 260 IPR011598 GO:0046983
Tpr2g3202 409 MobiDBLite consensus disorder prediction 187 220 - -
Tpr2g3202 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 208 270 IPR036638 GO:0046983
Tpr2g3202 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 210 259 IPR011598 GO:0046983
Tpr2g3202 409 PANTHER TRANSCRIPTION FACTOR BHLH69 42 368 - -
Tpr2g3202 409 Gene3D - 207 274 IPR036638 GO:0046983
Tpr2g3202 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 368 - -
Tpr2g3202 409 MobiDBLite consensus disorder prediction 387 409 - -
Tpr2g3202 409 SMART finulus 216 265 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3202 Tpr-Chr2 35804671 35809356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3202 196 398 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 68.599 1.06e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr2g3202 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3202 - - pvu:PHAVU_003G157100g 405.601