Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3192 ATGGTTGTGGAGGATCGTTTGGTGAGTGATGATGTTTCCGGTGACGATTTTCCTGATGGTCTGCGTGTTCTGGCTGTTGACGATGATCGGACTTGTCTCAAGTTGTTGGAGAATTTGCTTCGCAAATGCAAATATAACGTTACGACAACTACAGAAGCAGTGAAAGCGCTAGAAATGTTGAGGGAAAATAGAAATATGTTTGACCTTGTTATTAGTGATGTAAATATGCCAGAAATGGATGGATTTAAGCTCCTTAAGCAAGTTGGACTTGAAATGGATGTACCATTTATCATGTTGTCAGGAAATGGTGATAAAGAGAGGGTGATGAAAGGTGTGATACACGGCGCTTGTGACTATCTAATGAAACCGATTCGAATGGAAGAACTTCAGAACATATGGCAACATGTAGTGAGAAAGAGAAAGAAGATTGAAAGCAAGGATCAGAATAAAGATGCCGTTGCTCATGAGGAGAAAATCAGCAATGTGGATGGGGTATCTGATCCAGGCACCACATCTGAAAATATTGCTAACAAGAATCAAATCCGAGGACCTAAAAGAAAAGAACGAAGCGAGGAAGAAGAAGAAGAAGAAGAAGAGGAGCAGGAGGAGGAGGAATCGGAAGAAGATAATGATGACGAGAATGATGAGCAACGCTCGACTCGGAAGAAACCTCGTTTCATTTGGGATAACGACTTGCATAAACAATTTGTTTCTGTAGTTAGTCAACTAGGACTAGACAAGGCTTATCCTAAGAAAATACTTGACTTAATGAATGTTGAAGGGCTTACAAGGGAAAATGTAGCTAGCCATCTGCAGAAATACAGACTTAGTCTGAAAAGACCAACTAAACAGGCTAGAGTAGATGCTGCACTCGATTCTCACCCACAAATGGGTTCAGTGGGTGGGTTTTGCTCCTTGTCTGGATCAAGAAGAATCTTAAGTAGCACACCATATGCATCTAGCGACATATTTAGTCGGCTAAACACACCATCTAGATTGAACTTGAAAGGAATTAATTCTTCCGCACCAGTCCTTGCGCTTCAATCTCCAAACTTTAACAGTTTCAAGCAGCGGATGTTTTCTGCAAAAGAAAGCTCAAGTTTTTTACAAGGCATCCGAACATCTATGTCGATGAACCAGTTTCAGCAGAACAGTTATCCAACCGGTAATATGAAGTTAAATCCAATTGATGATTCAAGTGCATTTACAGCTTCCACTAGCTTTCAAAATATCAAAGCTACTGTTAGTAATGCTAATAGTTCTCTTTCCTGCATCCCAAGTAATCACCTGCTAACACATAATTCAAGACTGTTCATAAATCACTCTTCTGTTGGAGGTGCTGCTGTGAAAACAGAACTTTTTAACCATGCCACAAGCGGTTCCTCTAATTCATTAGATTATAATCGGCTCAGCGAAAGCTGGAAGAGTTCAGCTCAGTTTTCTAACTTTGCTGCCAATTCTTCTCCACTGAGTGGGAATTTTAACAATGATCAAATGTCTCACAATAACTTAAAGTTTTCCTCTCTCAGTGCGCATTTTAGGAAAACTCCAGTTGATTTTTCTTCGACGAGCGCCGTTACTGTTCCTTCGGAGGAAATGATGCAATGTCAAGATGGATTACTTGAGAGTGTTGTAAAGGGTGCATGTTACCTGCAGCAGCAAAATGCGGGTTCTGCCTTCAATACTACCTTGGATTCTCTAGCTTCTCCTAATGGAGACAATAGTTCCATGGGACATAGTTTAGCCCAAAATAATAGTCTGCCAACTACTCAGATGCCTGAAGTTGAGAAATTCTATTCAGATGCAAGAATTGAATCAAATGGTGATTGCTTTTTTGAGCAAATGCTTTCTCTAGAAGGATTCATTCAGAGTAATTATGCCTCCTTGGATGACACAATAAGTTAA 1905 0.4016 MVVEDRLVSDDVSGDDFPDGLRVLAVDDDRTCLKLLENLLRKCKYNVTTTTEAVKALEMLRENRNMFDLVISDVNMPEMDGFKLLKQVGLEMDVPFIMLSGNGDKERVMKGVIHGACDYLMKPIRMEELQNIWQHVVRKRKKIESKDQNKDAVAHEEKISNVDGVSDPGTTSENIANKNQIRGPKRKERSEEEEEEEEEEQEEEESEEDNDDENDEQRSTRKKPRFIWDNDLHKQFVSVVSQLGLDKAYPKKILDLMNVEGLTRENVASHLQKYRLSLKRPTKQARVDAALDSHPQMGSVGGFCSLSGSRRILSSTPYASSDIFSRLNTPSRLNLKGINSSAPVLALQSPNFNSFKQRMFSAKESSSFLQGIRTSMSMNQFQQNSYPTGNMKLNPIDDSSAFTASTSFQNIKATVSNANSSLSCIPSNHLLTHNSRLFINHSSVGGAAVKTELFNHATSGSSNSLDYNRLSESWKSSAQFSNFAANSSPLSGNFNNDQMSHNNLKFSSLSAHFRKTPVDFSSTSAVTVPSEEMMQCQDGLLESVVKGACYLQQQNAGSAFNTTLDSLASPNGDNSSMGHSLAQNNSLPTTQMPEVEKFYSDARIESNGDCFFEQMLSLEGFIQSNYASLDDTIS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3192 634 CDD REC_typeB_ARR-like 23 137 - -
Tpr2g3192 634 Gene3D - 223 280 - -
Tpr2g3192 634 Gene3D - 21 222 - -
Tpr2g3192 634 Pfam Myb-like DNA-binding domain 228 275 IPR001005 -
Tpr2g3192 634 Pfam Response regulator receiver domain 23 131 IPR001789 GO:0000160
Tpr2g3192 634 MobiDBLite consensus disorder prediction 144 222 - -
Tpr2g3192 634 Coils Coil 185 216 - -
Tpr2g3192 634 MobiDBLite consensus disorder prediction 192 214 - -
Tpr2g3192 634 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 625 - -
Tpr2g3192 634 SMART REC_2 21 133 IPR001789 GO:0000160
Tpr2g3192 634 PIRSF RR_ARR_type-B 4 628 IPR017053 GO:0003677|GO:0003700|GO:0009736
Tpr2g3192 634 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 625 IPR045279 GO:0009736
Tpr2g3192 634 SUPERFAMILY CheY-like 19 145 IPR011006 -
Tpr2g3192 634 SUPERFAMILY Homeodomain-like 220 280 IPR009057 -
Tpr2g3192 634 MobiDBLite consensus disorder prediction 164 179 - -
Tpr2g3192 634 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 223 276 IPR006447 GO:0003677
Tpr2g3192 634 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Tpr2g3192 634 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3192 Tpr-Chr2 35748419 35751428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3192 15 419 Response Regulator Gene Family AT2G25180 44.076 4.87e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Tpr2g3192 Response_reg 5.5e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3192 K14491 - mtr:MTR_4g131580 761.525