Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3173 ATGGATTACACCAATTCATCCCTTAATGTAGAGTCTGCTGCTATATCTAAACCCACCCCTCTCCGTAAGATTGCCGCGGTGGCGACTATAGGCGCCGGCATACAATTTGGTTGGGCTCTACAACTCTCCCTACTCACACCCTACATCCAACTCCTCGGAGTACCACACAAATGGGCAGCCAACATTTGGCTATGCGGCCCAATTTCTGGCATGATTGTCCAGCCACTCGTCGGTTACTATAGTGACCGAAGTCATTCACGTTTCGGTCGCCGTCGCCCTTACATCTTCTTTGGCTCTATATCAGTCGCTCTTGCTGTCTTTTTCATTGGCTTTGCTTCAGATATCGGTCATGCTTTAGGCGATGATCTGACCCAAAAGACACGTACTCGTGCCGTTGTCATATTTATCGTAGGCTTTTGGATACTAGATGTTGCCAACAATATGCTCCAAGGACCATGTCGTGCCTTCATCGGTGACCTCGCTGATGGTGATCACTCTCGAATGAGAACGGGTATGTCTTTGTTCTCTTTCTTCATAGCCATCGGTAATGTCCTTGGTTATGCTGCTGGATCTTACGGCAATCTCTACAAAATATTCCCTTTTACGGAAACCAAAGCATGTGACGTCTTTTGCGCCAATCTCAAAACATGTTTCTTTTTCTCAATTTTTCTTCTTGCCATAGTCTCTACCTTCGCTCTACTTTATGTAGAAGACATTCCACTAACATCAAAGCCAGAAATTCAATTAGCACCAGAGGATGACCCCGGCTGCTTCGGACAGTTATTAGAAGCATTTCACGGATTGAAGAAACCGATGTGGATGTTGCTGTTAGTAACAGCTGTTAATTGGGTAGCATGGTTCCCATTCTTTTTGTTCAACACTGATTGGATGGGCCATGAAGTGTATGGTGGAAAATCCGGCGACAAGGCTTATGCCACCGGTGTACGTGCTGGAGCATTGGGGCTAATGATTCAGGCAGTTGTGCTTGCTGTAATGTCATTGGCAGTTGAACCGTTGAGCCGTCTTGTTGGTGGAGCTAAGAGGCTGTGGGGAATGGTTAATATTATTTTTGCTATTGCACTTGCTATGACGGTTGTCATCACCAAGGCAGCGGAAAATGAACGGCACAGCAGCACCGGAGGGACACCGTCTATGGGCGTTAAGGCTGGGGCGTTCAGTTTCTTTGCCATTGTTGGAGTCCCTCTTGCGATTAATTTCAGTGTCCCGTTTGCTTTAGCATCTATCTATTCTAGCTCAGCAGGGGCCGGGCAAGGTTTATCTTTGGGAGTCCTCAATCTTGCAATTGTCATTCCACAAATGATAGTATCGGCAGTAAGTGGACCGGTTGATTCTTTGTTTGGTGGTGGTAACTTGCCTATGTTTGTGGTGGGTGCCGTGGCAGCAGTCATCAGCAGTGTATTGGCATTTATCCTTCTGCCTAAGCAGGAACATACGGCCAAGGCTACAACTGTGACTGGTGGTTTTCATTAA 1491 0.4675 MDYTNSSLNVESAAISKPTPLRKIAAVATIGAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGMIVQPLVGYYSDRSHSRFGRRRPYIFFGSISVALAVFFIGFASDIGHALGDDLTQKTRTRAVVIFIVGFWILDVANNMLQGPCRAFIGDLADGDHSRMRTGMSLFSFFIAIGNVLGYAAGSYGNLYKIFPFTETKACDVFCANLKTCFFFSIFLLAIVSTFALLYVEDIPLTSKPEIQLAPEDDPGCFGQLLEAFHGLKKPMWMLLLVTAVNWVAWFPFFLFNTDWMGHEVYGGKSGDKAYATGVRAGALGLMIQAVVLAVMSLAVEPLSRLVGGAKRLWGMVNIIFAIALAMTVVITKAAENERHSSTGGTPSMGVKAGAFSFFAIVGVPLAINFSVPFALASIYSSSAGAGQGLSLGVLNLAIVIPQMIVSAVSGPVDSLFGGGNLPMFVVGAVAAVISSVLAFILLPKQEHTAKATTVTGGFH* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3173 496 Gene3D MFS general substrate transporter like domains 268 492 IPR036259 -
Tpr2g3173 496 PANTHER SUGAR TRANSPORTER 4 486 - -
Tpr2g3173 496 TIGRFAM GPH_sucrose: sucrose/H+ symporter 20 482 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tpr2g3173 496 Gene3D MFS general substrate transporter like domains 22 246 IPR036259 -
Tpr2g3173 496 Pfam MFS/sugar transport protein 37 284 - -
Tpr2g3173 496 SUPERFAMILY MFS general substrate transporter 23 483 IPR036259 -
Tpr2g3173 496 CDD MFS_SLC45_SUC 26 476 - -
Tpr2g3173 496 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 4 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3173 Tpr-Chr2 35623442 35625821 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3173 6 496 Sucrose Transporter Gene Family AT1G22710 61.000 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3173 K15378 - gmx:100782007 663.299