Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3171 ATGGAAGGTAACGATTTTCCATGTCCATCACCCTCACCTTTTCGCTCTTCACTCCTCAAAGACATTTCCAATTTCAAAACCCCTAAACGAACTTCTTTCTATCTCAACCCTCAACAATCACCATCCTCTCATTACTTCACCGCTTCCAAATCCAAAAACACCACACTCCTTCGTCGTCCCAAGAAATCTTCATCAGCTGCTACAAACAAACTCAAAGCATTTCAACTTGAACACTCTAATTCTTCTCGAATCGCACAAATCAAAAAACAACAATCCCTAAAATCACTAGCCAAATCCCTCACTGTTTGGCTCAATTTTCTTCTTCAATCTCCTGCTTCATGTGGTTGCGATGTTTCAATCGCCGGAACTCAGATCGTTGATGCTTCCAAGGTCACTAAGGGGAAACGTGATAATGGTCCGGGAATTTCGGTTGGTGTTGATTCTACATGGCGAACTCCCAAGAGACAGAGGAAGATGACTTGTTCGTTGCGTTTTGGTAAGGAAAATGTATCTGCTACGGATTTGCAGAGTTCATCGTTTTCGCGTTTGAGGGATTCTCTGAACGATGTATGCAGTTTTGATGATTTCAAGCAGCGAATGAGTGTTTATTTGAGCCTCGGAACTTGTGAAGAAATCTTCCAAGTCATGAATCAAGTTACCAAGACAATTGATGAAGGAAGGCTTAATATGAAGGCACATTGTCCAATTGTGACCGATTTTGGGTTGAAGGATAAGGCCATAAAAATTCTTATGTGTTACAATCCAAGTTGGCTTCGAATTGGATTATATATAATTTTTGGTGGGGATTCTTTAGTGTCAAATGGGGATGGTGATTCTGATCAAGATGTTATTTTTCTAAAAATGGTCATTGACAAACTGTTTTTTACGCATGAGGGTTTAGCGAAAGCATATGCATATAACAAGATGGTTGAAGGAGTTTATAGGGCTGGTTACTATGAGAATTTGGGGAATGTGATTTTGAAGAGAATATTGTTGCTTGTGCTTATCCTTGATAAAGCTAAATGTCAAAGTTGTCTCCCAATTGAGTATGGTATTGACGGATTAGATGGTGGATCCCCTTTATTGTTCAAAGCAGAATCTTTGGTTAAATCAAGTAGTCAAGTGATCCAGGAATTTTTGTCATCTGATGTAATGCGCGGAGAAGGCAATCTTCTAACACATTTGGTTATTTTAGGATACAAAGTATCTCACCAACAGGGGCCTCTTGTTGAGTATGATTTCCGGGTCAGAGATTTATTTACAGATCTCCAAGACGGACTAAAACTGTGCAGAGCTATTCATCTTTTGCAAAATAATTCTTCTATCCTTAAGAAAATTGTTGTTCCTTCTGACAACCGCAAGAAAAAATTGGTAAACTGTGGTGCTGCCCTACAATATCTTAGACTAGCCGGGGTCTCACTAATTGATGAAGACGACACAATGATTTTAACAGAGGATATTATTAATGGAGATAAAGAACTTACAACTTCTTTGCTCTGGAATATGTTTGTTCACTTGCAGCTACCTTTGTTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCTAAAATTCGCGGACTTGGCACGGATCTCATAAGCAGTGCAAATTCTAGTTCTCTGGAATTGCTTTTGAAATGGATTCAGGCTGTTTGTGACAATTATGACTGCCCAGTTGACAATTTTCATTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTACTTCCAGAAGGAACTTCACAATGTCTGCTCGTTGAAGGAAGTTTATGAAAAAAGTGGAAAGACATCAATTATGTCAGTTAATGAGTATTCTGATGCACTGTACAATTTCATATTATCCCAGAAATTGACCACGTTACTGGGGAATTTTCCTGAGGTACTTCAGATTAGTGAGCTACTTCAATATAATGGCGCTTGCAGTGATCGAAGTGTGGTGATATTAGTTGTTTTCCTGGCAAGCCAATTATTTGTTAAGAAAAAAGTGGATCAGTTAAATTTTCATAAGCTATTGGGTTTTGCCGGCCAAAGCACAAATCTTAGGAGTTTGAGGACGGTGCAGTGCCATTCCAGTTCTGAATCAGCACAAAAGCCTTATGCTTCAGATGTGTGTGACAATGAAGATGCGGCAAGAAAATTCAAGGCCATCCAGACATGGTGGCAAGATATGGCTGATCGAAACTGTAGTATGCAGCCGGTTATTTCTATTTTGCGGACATCTAGGACCATTGAAAGCAACATCACCATTAGAGAAAATGCTGCAAGAACAATACAAGCACATGTCAGAGGATTGGTTGTACGGCGCAAGTTTCTGAAGATGGTAACTGCTGTTGCCCTTTTGCAGTCTGTTTTCAGAGCTTGGCTGAAAGTGAGGCAGGAGTCGGTCTGCATGATATTCACTACCGGTCAAATCTATGATTTCTCATGTGAAACATTGAAGCAATCCGAAATATATGAGAGCTATGCCATGCTTTTCTATCATAGACATTCTTTTTTGAGGTTGAAAAAGTCAGCACAGCTTATCCAGAAATCAGTGAGGAGTTGGCTCTATTGGAGGTCTCAACAAGGATGTAGTATAAGTCCTGACATCATGATTATAGACATGGTAGCTGCTGCCACCACTGTTCAGAAATTTTTTCGTGGTTGGATGGCGCGATCTAGATATATTCATCAGCTCGATCAAAAAGAAAAAGCTTTAAATTTAGCTGAACAGAAGCTTATCTTTGATCTTGAAACAAAGGCAGCTGTTAGCATACAGCTTGCTTGGAAAAACTACATATGCTGCGAGTCTACAAGGAAGGAGCACTTGTTTGCAACTAAAATTCAATGTAATTTCCGTAGGTGGTTATTGAGAAAACAATTTTTAAATCAGATTCAAGCTGTCATAAAAATTCAATCATATTTTCGAATGTGGAGATGTGTGAATGCTATTCAGAACTTCAAAACCATGTTTAAGGCTGTTATTGTCATTCAATCCTTTTTTCGTGGATGGATTGCTCGGAAGGATGCTTGTGCTCGTAGATATATTCACCAGCTCGATCAAAAAGAAAAAAAGGAGCACCTGTTTGCAACTAAAATTCAATGCAATTTCCGTAGGTGGTTATTGAGAAAACAATTTTTAAATCAGATTCAAGCTGTCATAAAAATTCAATCATATTTTCGAATGTGGACATGTGTGAAAGCTATTCAGAACTTCAAAACCATGTTTAAGGCTGTTATTGTCATTCAATCTTTTTTTCGTGGATGGATTGCTCGGAAGGATGCTTGTGCTCGTAGGAATCAGATTGTTGAGATTCAAAGGTATTGCCGGGGTTGGCTTGTGAAACGGAATTTCTTGTTCCAAAGAGATGCTATAATAAAGATCCAGAGTGTCAGTCGAAGTTTGAAATGCCAAAAAACACTCAATTGTCAGAAAGATGCTGCATTGGAGATCCAGCGCTTCATCAGGGGGCATTTAACTCGAAATCGGATATTAGGTAGTGCTTCAAATTTACGTGCAGTTGATACTGGTAGTTGCACTTCGAGACCAGTTGGCTTACGATGTTTTCAACTTGAAGCATTCATGTCTGCAATAGTGAAATTGCAACGGTGGTGGAAGGGTCTCCTGTTGCTTAAACGAAGGATTAGATCGGCCATCTTAATCCAGTCTTGTACTCGTGGGTGGATTGCCAGACGAAAGGCCATAGTTGAGACACACTGTATTAATGTCATGGAAGCTCTTAAAAGCCAAGAATATGCCGCATTGGAGCTCCAGCGCTATATTAGGGGGCATTTAACTCGAAATTTGTTATTAGGCAGTGCTTCTAAGCTACGTGCAGTTGCTGCTCGATGCATTTCAAAACCAACTGGCTGTTCTAGTTTTCAGTTGGAACTGTTCTTGTTTCAAGTAGTGAAATTGCAACGTTGGTGGAAGAATCTCATGTTACATAAATTGATGACAAAGTCTGCCATCATTATACAGTCTCACATCCGTGGGTGGATAGCCAGGCGAAAGACCATTGTTTATAAACATTATATTATTGTTATACAGTCCCACTGGAAAGGTTACGTTGCACGTAAGCAGTCAACAAAAAAACTAATGGATTTGCGCTCAAGACTACAAGAATCTTCCAAAAATATTGATGACAGCAAACGTCTCATAAACAGACTCTTAGCAGCACTTTCGCAGCTACTTAATATGAAGAGTCTTAGTGACATCCTTCATACTTGTTCAACACTGGATTTGGCGACAGGACATTCTCAGAGATGTTGTGAAGAACTTGTGGCCGCTGGGGCCATTGATACCTTGCTGAGACTTATTCAAACAATCAGCAGGAGTATCCCTGATCAGGAGGTTTTGAAGCATGTTTTGTCAACTCTCCGAAATCTTGCTCGCTATCCTCATCTGCTAGAAGTTCTGATACAAAGACACAATTCTATACAGACAATCGTCCTGGAGTTACTGAGGAATAAGGAAGAGGGCTTCTTCATTGCTTCTGAGCTTTTGAAGAAGATATGCTCAACTCACAAAGGCGTTGATGCCATACTCAAATCCCCTGCCTTACTAAAGAGACTGCGCAGTCTTGTTGAGGAGCTTACTAGAAAGACCACTTACCAGAAAAGAAATGTTCGGGGTCCTACTCCTAGTTCAGCTGTTATTGTTAGAGAAAACACAGATAGAAGATTGAAGGAGGCTACTGAGATTCTAAAGCTGCTAATTCACCCTTGA 4713 0.3972 MEGNDFPCPSPSPFRSSLLKDISNFKTPKRTSFYLNPQQSPSSHYFTASKSKNTTLLRRPKKSSSAATNKLKAFQLEHSNSSRIAQIKKQQSLKSLAKSLTVWLNFLLQSPASCGCDVSIAGTQIVDASKVTKGKRDNGPGISVGVDSTWRTPKRQRKMTCSLRFGKENVSATDLQSSSFSRLRDSLNDVCSFDDFKQRMSVYLSLGTCEEIFQVMNQVTKTIDEGRLNMKAHCPIVTDFGLKDKAIKILMCYNPSWLRIGLYIIFGGDSLVSNGDGDSDQDVIFLKMVIDKLFFTHEGLAKAYAYNKMVEGVYRAGYYENLGNVILKRILLLVLILDKAKCQSCLPIEYGIDGLDGGSPLLFKAESLVKSSSQVIQEFLSSDVMRGEGNLLTHLVILGYKVSHQQGPLVEYDFRVRDLFTDLQDGLKLCRAIHLLQNNSSILKKIVVPSDNRKKKLVNCGAALQYLRLAGVSLIDEDDTMILTEDIINGDKELTTSLLWNMFVHLQLPLLVDKTSLVGEISKIRGLGTDLISSANSSSLELLLKWIQAVCDNYDCPVDNFHSLVDGKAIWCLLDYYFQKELHNVCSLKEVYEKSGKTSIMSVNEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILVVFLASQLFVKKKVDQLNFHKLLGFAGQSTNLRSLRTVQCHSSSESAQKPYASDVCDNEDAARKFKAIQTWWQDMADRNCSMQPVISILRTSRTIESNITIRENAARTIQAHVRGLVVRRKFLKMVTAVALLQSVFRAWLKVRQESVCMIFTTGQIYDFSCETLKQSEIYESYAMLFYHRHSFLRLKKSAQLIQKSVRSWLYWRSQQGCSISPDIMIIDMVAAATTVQKFFRGWMARSRYIHQLDQKEKALNLAEQKLIFDLETKAAVSIQLAWKNYICCESTRKEHLFATKIQCNFRRWLLRKQFLNQIQAVIKIQSYFRMWRCVNAIQNFKTMFKAVIVIQSFFRGWIARKDACARRYIHQLDQKEKKEHLFATKIQCNFRRWLLRKQFLNQIQAVIKIQSYFRMWTCVKAIQNFKTMFKAVIVIQSFFRGWIARKDACARRNQIVEIQRYCRGWLVKRNFLFQRDAIIKIQSVSRSLKCQKTLNCQKDAALEIQRFIRGHLTRNRILGSASNLRAVDTGSCTSRPVGLRCFQLEAFMSAIVKLQRWWKGLLLLKRRIRSAILIQSCTRGWIARRKAIVETHCINVMEALKSQEYAALELQRYIRGHLTRNLLLGSASKLRAVAARCISKPTGCSSFQLELFLFQVVKLQRWWKNLMLHKLMTKSAIIIQSHIRGWIARRKTIVYKHYIIVIQSHWKGYVARKQSTKKLMDLRSRLQESSKNIDDSKRLINRLLAALSQLLNMKSLSDILHTCSTLDLATGHSQRCCEELVAAGAIDTLLRLIQTISRSIPDQEVLKHVLSTLRNLARYPHLLEVLIQRHNSIQTIVLELLRNKEEGFFIASELLKKICSTHKGVDAILKSPALLKRLRSLVEELTRKTTYQKRNVRGPTPSSAVIVRENTDRRLKEATEILKLLIHP* 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3171 1570 Gene3D - 1019 1069 - -
Tpr2g3171 1570 Gene3D - 870 938 - -
Tpr2g3171 1570 Gene3D - 752 799 - -
Tpr2g3171 1570 Gene3D - 1070 1117 - -
Tpr2g3171 1570 Gene3D - 975 1013 - -
Tpr2g3171 1570 Gene3D - 1118 1163 - -
Tpr2g3171 1570 Gene3D - 1208 1277 - -
Tpr2g3171 1570 Gene3D - 1311 1359 - -
Tpr2g3171 1570 Pfam Armadillo/beta-catenin-like repeat 1416 1460 IPR000225 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1209 1237 IPR000048 GO:0005515
Tpr2g3171 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 909 1009 IPR027417 -
Tpr2g3171 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1012 1089 IPR027417 -
Tpr2g3171 1570 Pfam Calponin homology (CH) domain 415 505 IPR001715 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1044 1073 IPR000048 GO:0005515
Tpr2g3171 1570 Gene3D - 402 507 IPR036872 -
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1314 1341 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1070 1099 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 870 899 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1021 1050 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 835 857 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1244 1266 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1092 1114 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 935 957 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1336 1358 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1115 1137 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1069 1091 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1043 1065 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 984 1006 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 869 891 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1313 1335 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1208 1230 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 751 773 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 958 980 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1020 1042 IPR000048 GO:0005515
Tpr2g3171 1570 SMART iq_5 1138 1160 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1139 1168 IPR000048 GO:0005515
Tpr2g3171 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1073 1157 IPR027417 -
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1245 1274 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1337 1366 IPR000048 GO:0005515
Tpr2g3171 1570 PANTHER UNCHARACTERIZED 1017 1241 - -
Tpr2g3171 1570 PANTHER UNCHARACTERIZED 9 1010 - -
Tpr2g3171 1570 PANTHER UNCHARACTERIZED 1244 1569 - -
Tpr2g3171 1570 Coils Coil 1354 1388 - -
Tpr2g3171 1570 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 9 1010 - -
Tpr2g3171 1570 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1017 1241 - -
Tpr2g3171 1570 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1244 1569 - -
Tpr2g3171 1570 Coils Coil 887 907 - -
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 752 780 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 985 1013 IPR000048 GO:0005515
Tpr2g3171 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1301 1359 IPR027417 -
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 936 965 IPR000048 GO:0005515
Tpr2g3171 1570 Gene3D - 1360 1532 IPR011989 -
Tpr2g3171 1570 SUPERFAMILY Calponin-homology domain, CH-domain 332 579 IPR036872 -
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 940 956 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1248 1263 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 754 772 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1315 1333 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1141 1158 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1072 1089 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1341 1356 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1191 1205 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 872 890 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 987 1004 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 961 975 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1046 1062 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1025 1041 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1211 1228 IPR000048 GO:0005515
Tpr2g3171 1570 Pfam IQ calmodulin-binding motif 1097 1113 IPR000048 GO:0005515
Tpr2g3171 1570 SMART arm_5 1415 1460 IPR000225 GO:0005515
Tpr2g3171 1570 Gene3D - 939 974 - -
Tpr2g3171 1570 SUPERFAMILY ARM repeat 1370 1525 IPR016024 -
Tpr2g3171 1570 Gene3D - 534 659 IPR036872 -
Tpr2g3171 1570 ProSiteProfiles Calponin homology (CH) domain profile. 385 507 IPR001715 GO:0005515
Tpr2g3171 1570 ProSiteProfiles IQ motif profile. 1093 1122 IPR000048 GO:0005515
Tpr2g3171 1570 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1426 1459 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3171 971 1083 Myosins gene family AT1G17580 31.858 6.23e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3171 K16743 - gmx:100817636 2199.09