Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3163 ATGGGTTGTCACGGTAGTAAGGAAGCGAAAAAATCCGCCGCAGAACATAGCCGCCACCGCCACCAATCATCCGCCGCAGCTGGTGCTGCTGCTACCGGCGGTACTAATTTCCAGTATCAAATTGTTCAACCTTCTTCCTCTCACGTTCAAACTTCACCACCACCAAAACCAAAACCAGAATCACATTCACACTCACATTCACATGCTTCAACAGTGACTACAACAACAACAACATCAAATCCAAAACCCTCTGCTTCTGAGAATGTGAGAACAGTGCAGAAACCAGACACAACAATATTAGGAAAACCCTTTGAAGATATTAAAAAGTTCTATACTTTAGGTAAAGAATTGGGTAGAGGTCAATTTGGGATTACTTATTTTTGTACTGAGAATTCAACTGGTTTAAATTATGCTTGTAAATCTATATTAAAGAGGAAGCTTGTTTCTAAAGCTGATAGAGAAGATATTAAGAGAGAGATTCAGATTTTGCAGCATTTATCTGGTCAACCTAACATTGTTGAATTTAAAGGTGCTTATGAGGATAGGTTTTCTGTTCATCTTGTTATGGAACTTTGTGCTGGTGGAGAGTTGTTTGATAGAATCATTGCTCAAGGTCATTATTCAGAGAGAGCTGCTGCTTCTATTTGTAGGGCTGTTGTTAATGTTGTGCACATTTGTCATTTTATGGGTGTATTGCATCGCGATTTGAAGCCGGAAAATTTCTTGCTTTCTAGTAAAGATGAAGGAGCAGCACTTAAAGCTACTGATTTTGGACTTTCTGTTTTCATTGAAGAAGGAAAGGTTTACCGTGATATGGTAGGAAGTGCTTACTATGTTGCTCCTGAGGTATTGCGTCGTAATTATGGAAAGGAAATAGATATTTGGAGTGCAGGCATCATATTGTATATTCTCCTTAGTGGTGTACCACCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCCATATTGGAAGGTGAACTTGACTTTGTTAGTGAACCATGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGAAAGATGCTGACACAGGATCCAAAGAAGAGAATTACTTCTACCCAAGTCCTTGAACACCCGTGGATGAGAGAAGGTGGAGAGGCCTCTGATAAACCGATTGATAGTGCTGTTCTATCTAGAATGAAACAATTCAGGGCAATGAATAAGTTCAAGAAACTTGCATTGAAGGTTATGGCTGAAAATCTATCAGAAGAAGAGATTAAAGGTCTCAAGGCAATGTTTGCAAATATGGACACTGATGGTAGTGGCACCATCACCTATGAAGAACTGAAGTCAGGCCTAGCACGAATTGGATCACGATTGTCTGAGCCTGAAGTGAAGCAACTTATGGAAGCTGCTGATGTTGATGGAAATGGCTCAATCGACTATCTTGAATTCATATCAGCTACAATGCATAGACACAGACTTGAACGAGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAAGACAATAGTGGGCATATTACTAGAGAAGAATTGGAGACTGCCATGACAAAGCATGGAATGGGTGATGAAGCAACAATAAAGGAAATTATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACCAGGCACAACTATTTTAAATCTACGGAATGGAGTCAATTTCACATGTTCGTGTGATTCATCGTGA 1725 0.3942 MGCHGSKEAKKSAAEHSRHRHQSSAAAGAAATGGTNFQYQIVQPSSSHVQTSPPPKPKPESHSHSHSHASTVTTTTTTSNPKPSASENVRTVQKPDTTILGKPFEDIKKFYTLGKELGRGQFGITYFCTENSTGLNYACKSILKRKLVSKADREDIKREIQILQHLSGQPNIVEFKGAYEDRFSVHLVMELCAGGELFDRIIAQGHYSERAAASICRAVVNVVHICHFMGVLHRDLKPENFLLSSKDEGAALKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRNYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGELDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSTQVLEHPWMREGGEASDKPIDSAVLSRMKQFRAMNKFKKLALKVMAENLSEEEIKGLKAMFANMDTDGSGTITYEELKSGLARIGSRLSEPEVKQLMEAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGHITREELETAMTKHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPPGTTILNLRNGVNFTCSCDSS* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3163 574 ProSiteProfiles EF-hand calcium-binding domain profile. 520 554 IPR002048 GO:0005509
Tpr2g3163 574 MobiDBLite consensus disorder prediction 1 97 - -
Tpr2g3163 574 Gene3D - 377 550 - -
Tpr2g3163 574 Gene3D Phosphorylase Kinase; domain 1 113 196 - -
Tpr2g3163 574 PANTHER SERINE/THREONINE-PROTEIN KINASE 60 553 - -
Tpr2g3163 574 MobiDBLite consensus disorder prediction 1 22 - -
Tpr2g3163 574 ProSitePatterns EF-hand calcium-binding domain. 425 437 IPR018247 -
Tpr2g3163 574 ProSiteProfiles Protein kinase domain profile. 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3163 574 SUPERFAMILY Protein kinase-like (PK-like) 110 377 IPR011009 -
Tpr2g3163 574 ProSitePatterns Protein kinases ATP-binding region signature. 117 144 IPR017441 GO:0005524
Tpr2g3163 574 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Tpr2g3163 574 SMART serkin_6 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3163 574 ProSiteProfiles EF-hand calcium-binding domain profile. 412 447 IPR002048 GO:0005509
Tpr2g3163 574 MobiDBLite consensus disorder prediction 28 49 - -
Tpr2g3163 574 ProSitePatterns EF-hand calcium-binding domain. 532 544 IPR018247 -
Tpr2g3163 574 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Tpr2g3163 574 Pfam Protein kinase domain 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3163 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Tpr2g3163 574 MobiDBLite consensus disorder prediction 66 95 - -
Tpr2g3163 574 CDD STKc_CAMK 110 368 - -
Tpr2g3163 574 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 60 553 - -
Tpr2g3163 574 CDD EFh 491 549 IPR002048 GO:0005509
Tpr2g3163 574 Pfam EF-hand domain pair 417 477 IPR002048 GO:0005509
Tpr2g3163 574 Pfam EF-hand domain pair 487 549 IPR002048 GO:0005509
Tpr2g3163 574 Gene3D Transferase(Phosphotransferase) domain 1 197 376 - -
Tpr2g3163 574 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Tpr2g3163 574 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Tpr2g3163 574 SMART efh_1 452 480 IPR002048 GO:0005509
Tpr2g3163 574 SMART efh_1 523 551 IPR002048 GO:0005509
Tpr2g3163 574 SMART efh_1 416 444 IPR002048 GO:0005509
Tpr2g3163 574 SMART efh_1 488 516 IPR002048 GO:0005509
Tpr2g3163 574 SUPERFAMILY EF-hand 408 548 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3163 Tpr-Chr2 35537595 35542417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3163 1 551 EF-hand Containing Proteins AT4G04720 74.229 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr2g3163 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3163 K13412 - gmx:100816859 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3163 2 35537595 35542417 Tpr2g3163 2 35537595 35542417 ECH