Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3155 ATGGCTGAGTCTGATTGGCCAAAGAAAGATAACCGTCGATTCCTTCATGTCGTATATCGTGTTGGTGACCTTGAACGAGCCATCAAGTTTTATACTGAGAGTCTTGGGTTTAAGCTTTTGAGGCAAAGAGATGTTCCAGCAGAGAAATACTCCAATGCTTTTGTTGGATTTGGCCATGAAACATCCTATTTTGCTATTGAATTGACCTATAATTATGGAGTGACTTCATATGATATTGGAGATGGCTTTGGACATTTTGGAATTGCAACTAAAGATGTTTACAAATCGGTTGAGGAAATTCGGGCCAAAGGTGGAAACATCACTAGGGAGCCTGGTCCAGTTGAGGGCGGAACAACTGTTATCGCCTTTGTGAAGGATCCTGATGGCTACACTTTTGCACTCATCCAAAGATCTGTAATTCATGACCCGTTTATTCAAATATCGCTTCGTATTGGTGATTTAGAACGTGGCATAAAGTTTTATGAAAAGGCTTTGGGCTTCAAGGTGCTGAGGAAGGTTGATAATCCTGAAAAGAAGTACACTATTGCTATACTTGGGTATGGAGAGGAGGACGAGACAACTGCGTTGGAGTTGACATACAATTATGGTGTCAAGGAATACTCCAAGGGAACTGGTTATGCACAGATTGCAATTGGTACCGATGATGTATACAAGAGCGCTGAAGTAATCGACCTAGTCGCACAAGAGGTTGGAGGGAAGATCACTACAAAACCAGGGCCAGTTTCTGGCATTGGCACGAAAGTTGTTGGCTTTTTAGACCCAGATGGATGGAAAACTGTGTTGGTTGACAATGAAGATTTCCTGAAGGAACTGGAGTGA 840 0.4238 MAESDWPKKDNRRFLHVVYRVGDLERAIKFYTESLGFKLLRQRDVPAEKYSNAFVGFGHETSYFAIELTYNYGVTSYDIGDGFGHFGIATKDVYKSVEEIRAKGGNITREPGPVEGGTTVIAFVKDPDGYTFALIQRSVIHDPFIQISLRIGDLERGIKFYEKALGFKVLRKVDNPEKKYTIAILGYGEEDETTALELTYNYGVKEYSKGTGYAQIAIGTDDVYKSAEVIDLVAQEVGGKITTKPGPVSGIGTKVVGFLDPDGWKTVLVDNEDFLKELE* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3155 279 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 133 IPR004360 -
Tpr2g3155 279 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 265 IPR004360 -
Tpr2g3155 279 Gene3D - 1 138 IPR029068 -
Tpr2g3155 279 PANTHER LACTOYLGLUTATHIONE LYASE 4 279 - -
Tpr2g3155 279 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 12 138 IPR029068 -
Tpr2g3155 279 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 143 271 IPR037523 -
Tpr2g3155 279 Gene3D - 140 279 IPR029068 -
Tpr2g3155 279 TIGRFAM glyox_I: lactoylglutathione lyase 4 143 IPR004361 GO:0004462|GO:0046872
Tpr2g3155 279 TIGRFAM glyox_I: lactoylglutathione lyase 145 274 IPR004361 GO:0004462|GO:0046872
Tpr2g3155 279 ProSitePatterns Glyoxalase I signature 1. 16 37 IPR018146 GO:0004462|GO:0046872
Tpr2g3155 279 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 270 IPR029068 -
Tpr2g3155 279 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 279 - -
Tpr2g3155 279 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 13 137 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3155 Tpr-Chr2 35462553 35465066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3155 146 270 Calmodulin-binding Proteins AT1G08110 26.667 6.05e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3155 K01759 - gmx:100793089 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3155 2 35462553 35465066 Tpr7g2661 7 33821956 33827809 PCT