Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3151 ATGGATTCAACACGCACCAAAGCACAAAACTCAGTTACGGAAGGCGAAATTAACGAAGTTGTCGAAGTTAGGCGACCTGTTGTGCTTGGCCTTTTTGCAACGGGCATTGTTCCAGCTGGTCAACCAAGAAGTCCTCCTAATGTGCCGCAGCCGATAGAAATTGACACATCGTCTCATTTTGCGACTGATAGGGAAGAGAACGACAGAGATGAGTTGATCAAATGGGCTCGAAGCGTGTCGCAAAGTTTAAGGTTCGCAATTATAGTTAGGCGATCTGATTCGGGCGAGAAGAGAAAGGCTCAATTGGTGTTAGAGTGTGAACGTAGTGGGAAGTATGTTCCAGCCAAGAAGAAGTTGAAATCCGATACCTCCGGAACAAGAAAATGCGAATGTCCTTTCCGACTCCGTGGGTATTACAACAAGGCAACAAAACTATGGCGTTTGACTGTTGTCAACGGTATGCATAACCACGAGTTGGACAAAGGGCTTGAAGGGCATCTCGTGGCGGGGCGTTTGAAACCACAAGAGAAGGATTTTATGGACGAGATGACAAGGAATGCGGTGGCTCCAAAAAACATATTGTCCACATTAAAGGAGAGAGATCCGGAAAACAAGACCTCTGCAAAGCAAGTGTACAACGCTCGTCATAGTATCGGACGGTTGTTGAAAATGGAGTAG 678 0.4631 MDSTRTKAQNSVTEGEINEVVEVRRPVVLGLFATGIVPAGQPRSPPNVPQPIEIDTSSHFATDREENDRDELIKWARSVSQSLRFAIIVRRSDSGEKRKAQLVLECERSGKYVPAKKKLKSDTSGTRKCECPFRLRGYYNKATKLWRLTVVNGMHNHELDKGLEGHLVAGRLKPQEKDFMDEMTRNAVAPKNILSTLKERDPENKTSAKQVYNARHSIGRLLKME* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3151 225 Pfam Transcription factor AFT 107 159 IPR014842 GO:0000981|GO:0036086
Tpr2g3151 225 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 68 216 IPR010061 GO:0004491
Tpr2g3151 225 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE ISOFORM X1 68 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3151 Tpr-Chr2 35442903 35443990 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g3151 AFT 1.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3151 - - mtr:MTR_1g012760 150.984