Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3138 ATGTTAACATTTCCGATGAATCTGATGACTAATTGGTCTGATGATAATGAAAATGATAATGATGGTGATCAACGGCGAATTAATCGTGTTATTGTCGATGAAGTCGATTTCTTCTCGGATAGAAATGATAAATCATCGTCGCCTGATGATGATGTTTCCATGAAGATCAATAATGAAATTTATGATCCTCATTCCAATCTCGCCGCTGACCATGTCAACACTGGTTTACAACTCCTGATTAGTAATACCGGCAGTGATCAATCAATGGTGGAAGATGTATCTTCAATAAATGCTGAAGAGAAGCGTGCCAAAACTGCTCAGGTGGAACAATTGCAAGAGGAGCTTCGATTTAAGAATGAAGAGAACCAAAAGCTGAAGGAAATGCTGAACACCATGAGAAGTAGCCATACAAACTTGCAAATGCGTTATGTCTCCTTGATGCAACAGAAACAGAACCAAACAGAACATGATCAGGTTGTCCGAGGAAAATCTGAGGAGAAAGGAGATAGTGTGGTGGCTAGAAAGTTCACGAGTGGCACAGCAGAAGTAGATGATCAGCAAGTATCAAACTCTTGTAATTCAGATGAAAAAACTCAAACAAGCACACCCCAGAACAAACGGAAATTAGAGACTGATCCAGACTCATCAGAACTAGTACAAGCTTGGGATCCAATTAAGCGTCCCATATTAAACCCACCCAATGCCGCTGATCAATCTGCTGCTGAAGCCACTATGAGAAAAGCACGTGTCTCTGTCCGTGCCCGATCAGAAGCCCACATGATCAATGATGGATGCCAATGGCGAAAATATGGACAAAAAATGGCTAAGGGAAACCCTTGTCCTCGAGCATATTACAGATGCACAATGGCTATGGGTTGCCCTGTTCGCAAACAAGTTCAGCGTTGTGCGGAGGACAGAACAATTCTCATAACAACATATGAAGGGACGCATAGCCATCCTCTGCCACCTGCCGCTGTGGCAATGGCGTCGACCACTGCAGCAGCTGCTACCGTGTTACTATCTGGTTCAATGTCAAGTGCTGATGGGGTGATCAATCCCAACATACTAGCCAGAATTCTTCCTAATTGCTCTTCTAGCATGGCCACACTCTCAGCATCAGCACCATTTCCTACTGTGACACTAGACCTTACACGGGACGCCACAGATAATAACCAAAATTCTCATTCCCAATTTCAGCTTGGACAGCCTCAAAACTTTGGATCAGGACAATTGCCACAGGTAATTGCACAAGCACTTTATAACACATCCAAATTCTCTGGCCTTCAATTGTCTCAGGATGTTGGGGGATCTTCCCAATTGAATCATACTCAACAAGCATCATCACTCAGTGCTGCCATCACTTCGGATCCAAACTTCACCGCAGCACTCGCCGCGGCTATCTCCTCCATAATTGGCGCTTCTCCTCCCAACAATAACAACAACAATAATCCCAATATCATCAACAGTACTACCTACAATCAGTAG 1485 0.4377 MLTFPMNLMTNWSDDNENDNDGDQRRINRVIVDEVDFFSDRNDKSSSPDDDVSMKINNEIYDPHSNLAADHVNTGLQLLISNTGSDQSMVEDVSSINAEEKRAKTAQVEQLQEELRFKNEENQKLKEMLNTMRSSHTNLQMRYVSLMQQKQNQTEHDQVVRGKSEEKGDSVVARKFTSGTAEVDDQQVSNSCNSDEKTQTSTPQNKRKLETDPDSSELVQAWDPIKRPILNPPNAADQSAAEATMRKARVSVRARSEAHMINDGCQWRKYGQKMAKGNPCPRAYYRCTMAMGCPVRKQVQRCAEDRTILITTYEGTHSHPLPPAAVAMASTTAAAATVLLSGSMSSADGVINPNILARILPNCSSSMATLSASAPFPTVTLDLTRDATDNNQNSHSQFQLGQPQNFGSGQLPQVIAQALYNTSKFSGLQLSQDVGGSSQLNHTQQASSLSAAITSDPNFTAALAAAISSIIGASPPNNNNNNNPNIINSTTYNQ* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3138 494 SUPERFAMILY WRKY DNA-binding domain 254 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3138 494 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 483 IPR044810 GO:0003700
Tpr2g3138 494 MobiDBLite consensus disorder prediction 1 15 - -
Tpr2g3138 494 MobiDBLite consensus disorder prediction 156 172 - -
Tpr2g3138 494 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3138 494 Coils Coil 101 135 - -
Tpr2g3138 494 Gene3D WRKY domain 246 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr2g3138 494 MobiDBLite consensus disorder prediction 149 218 - -
Tpr2g3138 494 PANTHER WRKY TRANSCRIPTION FACTOR 6 16 483 - -
Tpr2g3138 494 Pfam WRKY DNA -binding domain 262 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3138 494 MobiDBLite consensus disorder prediction 1 26 - -
Tpr2g3138 494 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr2g3138 494 MobiDBLite consensus disorder prediction 180 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3138 Tpr-Chr2 35374387 35377231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3138 2 485 WRKY Transcription Factor Family AT1G62300 48.833 7.45e-128 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr2g3138 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3138 - - mtr:MTR_4g132430 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3138 2 35374387 35377231 Tpr2g3138 2 35374387 35377231 ECH
Tpr7g2641 7 33612339 33615385 Tpr2g3138 2 35374387 35377231 ECH
Tpr7g4128 7 50373702 50377851 Tpr2g3138 2 35374387 35377231 ECH
Tpr4g1433 4 13960067 13963221 Tpr2g3138 2 35374387 35377231 ECH