Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3136 ATGGAGGGTAGACCAAACAGTCAAAATCCATTGTTCGTGAACTTAGCTTCAGGGGAAAGGCTGACGATGTCGGAGGAAACAACTCGTGCTATTGTTGGACATGGAGGGGTTCCTCCGTTAATCGAGCTTTGTCAGGTTGGTGATTCTGTTTCACAATCTGCAGCAGCTTGTACTTTGAAGAATATCTCGGCTGTTCCGGAAGTGAGAAATGTTTTGGCTGAAGAAGGTGTTGTTAAGGTTATGATCAATCTACTCTGCAATGGAATTTTGTTAGGTACTAAAGAGTATGCTGCTGAATGTTTGCAGAATCTCACTGCAAGCAATGAGAGTCTAAGAAAATCGGTTATATCAGAAGGCGGTGTTCAGAGTCTTTTAGCTTATCTTGATGGTCCACTTCCTCAAGAATCTGCAGTTGGTGCATTGAGGAATCTCGTCGGTTCGGTTCCCGAGGAAACATTGGTTTCTGTCAGAATACTTCCTTGCTTAGTTCATGTGTTGAAGTCAGGATCGTTAGGTGCGAAACAAGGCGCAGTGTCGGTTATATGCAAAATTTGCAGCACAATTGAGATGAAGAAAATGTTAGGTGAAGTTGGTTGCATACCTCTATTGATCAACATGCTTGAGGCTAAAGCAAATACTGCTAAAGAACTTGCAGCACAAGCAATTGCAAGCTTGATGATTTTGTCTGAGAATCGAAGAGAAGTTAAGAAAGACGATAAAAGTGTGCCGAATTTGGTTCAATTGCTTGATCCAAGTCAACAAAATACTGCAAAGAAATATGCAGTTTGTTGTCTTGCATCACTTTCTTCATCTAAGAAATCCAAGAAGTTGATGATTTCATATGGAGCAATAGGGTATTTGAAAAAGCTTATTGAGATGGAGATTCCAGGTGCTAAAAAGTTGCTTGAGAGATTGGAAAGAGGGAAACTCAGAAGTTTGTTTAGCAGAAAATAG 954 0.4057 MEGRPNSQNPLFVNLASGERLTMSEETTRAIVGHGGVPPLIELCQVGDSVSQSAAACTLKNISAVPEVRNVLAEEGVVKVMINLLCNGILLGTKEYAAECLQNLTASNESLRKSVISEGGVQSLLAYLDGPLPQESAVGALRNLVGSVPEETLVSVRILPCLVHVLKSGSLGAKQGAVSVICKICSTIEMKKMLGEVGCIPLLINMLEAKANTAKELAAQAIASLMILSENRREVKKDDKSVPNLVQLLDPSQQNTAKKYAVCCLASLSSSKKSKKLMISYGAIGYLKKLIEMEIPGAKKLLERLERGKLRSLFSRK* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3136 317 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 17 317 - -
Tpr2g3136 317 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 17 317 - -
Tpr2g3136 317 Gene3D - 8 149 IPR011989 -
Tpr2g3136 317 Pfam Armadillo/beta-catenin-like repeat 25 64 IPR000225 GO:0005515
Tpr2g3136 317 SUPERFAMILY ARM repeat 23 296 IPR016024 -
Tpr2g3136 317 Gene3D - 150 299 IPR011989 -
Tpr2g3136 317 SMART arm_5 24 64 IPR000225 GO:0005515
Tpr2g3136 317 SMART arm_5 65 106 IPR000225 GO:0005515
Tpr2g3136 317 SMART arm_5 147 186 IPR000225 GO:0005515
Tpr2g3136 317 SMART arm_5 187 227 IPR000225 GO:0005515
Tpr2g3136 317 SMART arm_5 228 270 IPR000225 GO:0005515
Tpr2g3136 317 SMART arm_5 107 146 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3136 Tpr-Chr2 35355765 35358679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3136 162 300 U-box Gene Family AT3G54790 27.338 6.00e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3136 - - var:108346326 464.922