Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3124 ATGAAAGCCTCAAAGCAACAGAGAGGATGCAAAGCCTTGTGTTGTAGCAGCAATAGGTTTAGTGTTTCTTCTTCTTCTTCAGAGGAAGCAGAGAGTTCTTCTTCTGCCTCTAATAGGTTTCCTTCTGTTTCAACACTAGCACATGCTATGGTGCAAGAAAGACTTGACCAAATGATTAGAGAAAAGCTTGAAGCTACTAGATATGTAGAGAGGAGAAGGGAGCAGAGAAGAAGATCAGAAGGAACTAAGTTTGTTGTAATGTTAGCTATGGAAAAATGTTCTTATGATCCTAGAGAGGATTTTAGGGAGTCGATGATGGAAATGATAACTACGAATCGCCTTCAAGACGCGAAAGATCTTCGTAGTTTATTGAACTATTATATGTCGATGAATTCGGAAGAATATCATAGTCTTATACTTGAAATTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGGAGTAAATGCAAATGGTGA 480 0.3729 MKASKQQRGCKALCCSSNRFSVSSSSSEEAESSSSASNRFPSVSTLAHAMVQERLDQMIREKLEATRYVERRREQRRRSEGTKFVVMLAMEKCSYDPREDFRESMMEMITTNRLQDAKDLRSLLNYYMSMNSEEYHSLILEIFHEVCTNLFLSWSKCKW* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3124 159 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 152 IPR038933 GO:0045892
Tpr2g3124 159 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 89 151 IPR006458 -
Tpr2g3124 159 ProSiteProfiles OVATE domain profile. 90 149 IPR006458 -
Tpr2g3124 159 PANTHER TRANSCRIPTION REPRESSOR-RELATED 7 152 - -
Tpr2g3124 159 Pfam Transcriptional repressor, ovate 94 151 IPR006458 -
Tpr2g3124 159 MobiDBLite consensus disorder prediction 19 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3124 Tpr-Chr2 35280265 35281204 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr2g3124 Ovate 4.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3124 - - var:108330150 199.519