Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3121 ATGGGGAAATCAGGGGGTAGAAGAAAGAAGGGTGGTGCTGTTGTTGTTGACAACAATTCAGCTTCTGCACAAATTCCAAACGGTGGTGTTGAATTGGATTCTTCAATTTTTTTGAAAAAGGCACATGAAATGAAAGAAGAAGGAAATAGAAGATTTCAGAGTAAGGATTATGCTGGTGCTCTTGAAAACTATGAGAATGCTCTTCGATTGACACCGAAAACTCATCCTGATAGGGCTGTTTTTCATAGCAATAGGGCTGCTTGTTTGATGCAAATGAAACCTATTGATTATGAATCTGTTATTTCTGAGTGTACTTTGGCTCTTCAGGTTCAGCCTCAATTTGTTCGGGCTCTTCTTCGCAGGGCTCGAGCGTTTGAGGCTGTTGGTAAGTATGAATTGGCTGTGCAAGATGTGCAGTTGTTGTTGGCTTCTGATCCTAATCATAAGGATGCTTTGGATATTGCTCAGAGGTTGAGGGCTGCTTTTGGACATCGTCAGGAAGCTCAGCAGGATCTACACAGTCGACCTTCTCCTGCTGCACTTGGCGCTTCTGCTGTCCGTGGTGCTCCTATTGCTGGGTTAGGTCCGTGTTTGCCAGCACGGCCTGCGTCAAAGAAGGGAGCAAATTCTGCTGTTGGGTCGGTTGTTTCTCCTAATAGCAAGTTGGACAAGTCACAAAATGTTTTACTGCCAAATGAAAATGGTCCTGAGAACAAGACCCAGTTGCCAAAAGTTGTATCGAAGCCTTTTAACAACGGTTCTGCAGTGCAACCTAACTCGAAAAATGAGAACCAGAAGGATGTTTACAGGAAGGTTTCGGAGGTTGCAATTCGGTGTAGACCATTGAAACTTGTTTATGATCATGACATTAGGCTTGCCCAGATGCCGGTGAACTGCAGTTTCAGAGTACTGAGAGATGTAGTAAGCAAAAGATTTCCTTCATCCAATTCAGTTCTCATCAAGTACAAGGATGGTGATGGTGATTTGGTTACTATAACATCTACTGATGAACTCAGATTGGCAGAGTCTTTTGTTGATAGCCATCTGGTGAAGGAACCCGAATCAGATAAAAGTGATTCAATTTCGGTGCTGAGACTACATATTGTTGAAGTTAGTCCGGAGCAGGAGCCACCTTTGGAAGAAGAGGAAGAGAAACTTGTTGAGAATGAAGGGACCAAGGGAGATGAGACTGGATCTCATTCTTCCCTTGGTGATTCGGTCCCTGAAGTCACAGAAGTTACTGATGTTACAGAAGTTACTGAAGTTCCTGACACTGATGTTGATAAGACAATAAATACTGAAGTTCCTGATACTGATGTTGATAAGACAATAAAGAAGGATGCTTCAAAGGAAAAGACGGGTGCCACAGGAGAAAATGAATGCAAAGAAGTGGAGATGGATGATTGGTTGTTTGAATTTGCTCAGCTTTTCCGCTCACATGTTGGTATTGACCCAGATGCTCATATTGACTTGCATGAGCTTGGGATGGAGCTTTGTTCAGAGGCACTTGAAGAAACAGTAACAAGTGAGGAGGCTCAGGATCTATTTGACAAGGCTGCTTCAAAATTCCAGGAGGTGGCAGCTTTGGCATTCTTCAACTGGGGTAATGTTCACATGTGTGCTGCTAGGAAGCGGATTCCTCTAGACGAGTCAGCTGGGAAAGATGTAGTGGCCGAACAGCTTCAAGTGGCTTATGACTGGGTCAAAGAAAAGTATTCTTTGGCAAAAGAGAAATATGAGGAAGCACTCGTGATCAAACCAGATTTCTATGAGGGACTTTTGGCTCTGGGCCAGCAACAATTTGAAATGGCCAAGCTCCATTGGTCTTTTGCAATTGCTAAGAAGATAGATCTTACAAGCTGGGATCCAACGGAAACTCTTCAACTGTTTAACAGTGCGGAGGAGAAGATGAAATCTGCAACAAATATGTGGGAGAAGTTGGAGGAACAGAGAGCAAAGGAGCTAAAGGACCCAAATGCAACCAAGAAAGAAGAAGTATTGAGAAGAAGAAAGAAACAGGGAAGTGCTGCTGAAGGCGAGTCTTCTAGTGCTGGCGGCCAAGGTGAGATATCTGCCGAAGAAGCTGCTGAACAAGCAGTGGTCATGAGATCACAGATTCATCTCTTCTGGGGCAATATGCTTTTCGAAAAATCCCAAGTTGAATGCAAATTAGGAATGGATGGTTGGAAGAAAAATCTAGATGCTGCAACAGAGCGCTTTAAGCTTGCAGGAGCTTCTGAGACAGATATTTCGATGGTTCTTAAGAATCATTGCTCAAATGGAGATGCAAAAGGTGATGATAAAAAAGTCCAGAGCCCACAACCCAACAAGACTGATGAACTAGAGATCAATAAGGCCAATCAAGTATGA 2370 0.4338 MGKSGGRRKKGGAVVVDNNSASAQIPNGGVELDSSIFLKKAHEMKEEGNRRFQSKDYAGALENYENALRLTPKTHPDRAVFHSNRAACLMQMKPIDYESVISECTLALQVQPQFVRALLRRARAFEAVGKYELAVQDVQLLLASDPNHKDALDIAQRLRAAFGHRQEAQQDLHSRPSPAALGASAVRGAPIAGLGPCLPARPASKKGANSAVGSVVSPNSKLDKSQNVLLPNENGPENKTQLPKVVSKPFNNGSAVQPNSKNENQKDVYRKVSEVAIRCRPLKLVYDHDIRLAQMPVNCSFRVLRDVVSKRFPSSNSVLIKYKDGDGDLVTITSTDELRLAESFVDSHLVKEPESDKSDSISVLRLHIVEVSPEQEPPLEEEEEKLVENEGTKGDETGSHSSLGDSVPEVTEVTDVTEVTEVPDTDVDKTINTEVPDTDVDKTIKKDASKEKTGATGENECKEVEMDDWLFEFAQLFRSHVGIDPDAHIDLHELGMELCSEALEETVTSEEAQDLFDKAASKFQEVAALAFFNWGNVHMCAARKRIPLDESAGKDVVAEQLQVAYDWVKEKYSLAKEKYEEALVIKPDFYEGLLALGQQQFEMAKLHWSFAIAKKIDLTSWDPTETLQLFNSAEEKMKSATNMWEKLEEQRAKELKDPNATKKEEVLRRRKKQGSAAEGESSSAGGQGEISAEEAAEQAVVMRSQIHLFWGNMLFEKSQVECKLGMDGWKKNLDAATERFKLAGASETDISMVLKNHCSNGDAKGDDKKVQSPQPNKTDELEINKANQV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3121 789 PANTHER - 1 413 - -
Tpr2g3121 789 PANTHER - 438 775 - -
Tpr2g3121 789 SMART PB1_new 279 371 IPR000270 GO:0005515
Tpr2g3121 789 SUPERFAMILY CAD & PB1 domains 280 343 - -
Tpr2g3121 789 MobiDBLite consensus disorder prediction 209 242 - -
Tpr2g3121 789 MobiDBLite consensus disorder prediction 372 412 - -
Tpr2g3121 789 Gene3D - 281 350 - -
Tpr2g3121 789 SUPERFAMILY TPR-like 510 606 IPR011990 GO:0005515
Tpr2g3121 789 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Tpr2g3121 789 Coils Coil 630 650 - -
Tpr2g3121 789 MobiDBLite consensus disorder prediction 758 789 - -
Tpr2g3121 789 MobiDBLite consensus disorder prediction 760 775 - -
Tpr2g3121 789 MobiDBLite consensus disorder prediction 650 691 - -
Tpr2g3121 789 CDD PB1 282 347 - -
Tpr2g3121 789 PANTHER PROTEIN CLMP1 438 775 IPR044517 -
Tpr2g3121 789 PANTHER PROTEIN CLMP1 1 413 IPR044517 -
Tpr2g3121 789 Pfam PB1 domain 281 370 IPR000270 GO:0005515
Tpr2g3121 789 SUPERFAMILY TPR-like 38 172 IPR011990 GO:0005515
Tpr2g3121 789 Gene3D Tetratricopeptide repeat domain 38 167 IPR011990 GO:0005515
Tpr2g3121 789 SMART tpr_5 79 114 IPR019734 GO:0005515
Tpr2g3121 789 SMART tpr_5 115 148 IPR019734 GO:0005515
Tpr2g3121 789 SMART tpr_5 41 74 IPR019734 GO:0005515
Tpr2g3121 789 MobiDBLite consensus disorder prediction 210 242 - -
Tpr2g3121 789 ProSiteProfiles PB1 domain profile. 279 371 IPR000270 GO:0005515
Tpr2g3121 789 MobiDBLite consensus disorder prediction 650 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3121 Tpr-Chr2 35258485 35261827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3121 41 159 Calmodulin-binding Proteins AT3G25230 30.000 1.44e-09 59.3