Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3120 ATGAAACTCGACAACTCCAACTCCAACGGCCAGATGTCTATCGCCGCCGACGTTACTCCGCCGAATAACTCCGACGATGCCGATGAGGCATTCGTTCCGCCGCTCAATTTCGCTATGGTTGATAACGGTATTTTCAGGTCTGGTTTTCCCGATTCTGCCAACTTCGGATTCTTGAAATCGCTTCGTCTCCGTTCCGTAATATGTTTGTGCCCTGAACCCTATCCTGAAACGACTGCGGAGTTTTTGAAGGCCAGTGGAATAAGGCTTTATCAATTCGGTATCGATGGATGCAAGGAACCCTTTGTCAACATCCCAAATGATAAGATTCGCGAAGCTTTGAAAATAGTGCTCGATGTTCGGAACCACCCCGTGCTGATTCATTGTAAACGAGGAAAGCACCGCACTGGTTGTCTTGTGGGATGCATAAGAAGACTGCAGAGATGGTGTCTATCATCTATTTTTGATGAGTACCAAAGGTTTGCAGGTGCGAAAGCCAGAGTGTCAGACCAGAGGTTCATCGAATTGTTTGATATTTCCAGTTTGAAGCACAACCCACTCTCCTTTTCGTGCTCAAAGAAATAG 582 0.4656 MKLDNSNSNGQMSIAADVTPPNNSDDADEAFVPPLNFAMVDNGIFRSGFPDSANFGFLKSLRLRSVICLCPEPYPETTAEFLKASGIRLYQFGIDGCKEPFVNIPNDKIREALKIVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQRWCLSSIFDEYQRFAGAKARVSDQRFIELFDISSLKHNPLSFSCSKK* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3120 193 ProSitePatterns Tyrosine specific protein phosphatases active site. 126 136 IPR016130 GO:0016311|GO:0016791
Tpr2g3120 193 Gene3D Protein tyrosine phosphatase superfamily 30 180 IPR029021 -
Tpr2g3120 193 PANTHER TYROSINE-PROTEIN PHOSPHATASE 20 191 - -
Tpr2g3120 193 MobiDBLite consensus disorder prediction 1 25 - -
Tpr2g3120 193 MobiDBLite consensus disorder prediction 1 20 - -
Tpr2g3120 193 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 31 178 IPR029021 -
Tpr2g3120 193 CDD PFA-DSP_Siw14 31 177 - -
Tpr2g3120 193 PRINTS Plant and fungal dual specificity phosphatase signature 31 48 IPR020428 GO:0016791
Tpr2g3120 193 PRINTS Plant and fungal dual specificity phosphatase signature 68 81 IPR020428 GO:0016791
Tpr2g3120 193 PRINTS Plant and fungal dual specificity phosphatase signature 87 101 IPR020428 GO:0016791
Tpr2g3120 193 PRINTS Plant and fungal dual specificity phosphatase signature 104 118 IPR020428 GO:0016791
Tpr2g3120 193 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 190 IPR020422 GO:0006470|GO:0008138
Tpr2g3120 193 Pfam Tyrosine phosphatase family 32 185 IPR004861 -
Tpr2g3120 193 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 20 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3120 Tpr-Chr2 35250101 35252602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3120 13 193 Protein tyrosine phosphatase (PTP) family AT4G03960 70.053 3.94e-98 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3120 K18045 - gmx:100785520 350.132