Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3093 ATGCAAAGGCAATTCTGTCACCAATCTGATCTTTCTTTCGGAACCATGAAGGAGGAATGTTTCCCCGTGGAATCATACCCTGAAATTGCTGCTTTCATAGATTGCGATTCTCCTTCATATGCCAGTGTATCATCTAACAAGAGTCCATTTTCTCCACAAGATTCTCAATCGCAATCATGCCATTCAGATCATCAACAATCATCTGACAACACTTATGGATCGCCAATAAGCGGGATGTCTAGTGTTGATGATGGCCATGATTTGAAGCACAAACTTAGAGAACTGGAGAATTCGTTGTTGGGGTCTGATGATTTCGATATTGTTGACAGTTACGGAAACTGCATGGAGACTAGCCTCCACGGAGCATCTCCATCAGCTAAATATGATTGGGATCTAATTGCAGAAAACATTCAAAAGCTTGACTTGAAAGAAGTCCTCTTGCTATGTGCACAGGCTGTGTCTGATGGTGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGCGAAGATGGTATCGGTCGCTGGAGATCCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCTAGATTAGAATCGTCTGGAAGCTTGATCTACAAGGCATTGAAATGTGACCAACCAACGAGCAAAGAACTATTGAGTTACATGCACGTTCTGTATCAGATTTGTCCATATTTTAAGTTTGCATACATATCTGCAAATGCTGTTATTTCTGAAGCAATGGCAAATGAATCCATGATTCATATAATTGATTTCCAAATTGCACAGGGAACACAGTGGCTTCTACTTATTCAAGCGCTTGCAAACAGGCCTGGCGGACCACCTTTTATTCGGATAACAGGTGTCGATGATTCACAATCATTTCATGCGCGCGGTGGTGGACTTCAGATTGTAGGAGAAAGGATTTCAGACTATGCCAAGTCTTGCGGAGTTCCATTTGAGTTCCACAACACTGCAATGTCTGGTTGTGAAGTCCAACGAGAAAATCTTAAAATTATACCTGGAGAAGCCCTTGCCGTCAATTTTCCCTATTTTTTGCACCATATGCCGGATGAGAGTGTGAGCATAGAGAACCATAGAGACAGATTGTTGAGATTGGTTAAGAGTTTGTCTCCAAAGGTTGTTACCCTTGTTGAGCAAGAATCCAACACCAATACATCTCCATTCTTTCATAGGTTTGTGGAGACAATGGATTATTACACAGCTATGTTTGAATCAATAGACGTGGCTTGTGCCAAAGACGATAAGAAACGGATTAGTACAGAGCAGAACTGTGTGGCACGGGACATTGTTAACATGATAGCCTGTGAGGGGATTGAGAGGGTGGAGAGGCATGAAGTTTTTGGAAAGTGGAGGATGAGATTTTCCATGGCTGGATTCAGACAATGCTCATTGAATTCTTCAGTGATGCATTCTGTCCAAAATTTGTTGAAGGACTACAATCAAAATTATAGACTGGAACATAGAGATGGTGCTCTCTATCTTGGTTGGATGAAGAGAGCTATGGCCACCTCCTCTGCTTGGAGATGTAACTGA 1548 0.4212 MQRQFCHQSDLSFGTMKEECFPVESYPEIAAFIDCDSPSYASVSSNKSPFSPQDSQSQSCHSDHQQSSDNTYGSPISGMSSVDDGHDLKHKLRELENSLLGSDDFDIVDSYGNCMETSLHGASPSAKYDWDLIAENIQKLDLKEVLLLCAQAVSDGDIPTARGWMDNVLAKMVSVAGDPIQRLSAYLLEGLRARLESSGSLIYKALKCDQPTSKELLSYMHVLYQICPYFKFAYISANAVISEAMANESMIHIIDFQIAQGTQWLLLIQALANRPGGPPFIRITGVDDSQSFHARGGGLQIVGERISDYAKSCGVPFEFHNTAMSGCEVQRENLKIIPGEALAVNFPYFLHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHEVFGKWRMRFSMAGFRQCSLNSSVMHSVQNLLKDYNQNYRLEHRDGALYLGWMKRAMATSSAWRCN* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3093 515 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 9 512 - -
Tpr2g3093 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 9 512 IPR005202 -
Tpr2g3093 515 MobiDBLite consensus disorder prediction 44 74 - -
Tpr2g3093 515 Pfam GRAS domain family 142 513 IPR005202 -
Tpr2g3093 515 ProSiteProfiles GRAS family profile. 133 513 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3093 Tpr-Chr2 35054710 35057539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3093 17 515 GRAS Transcription Factor Family AT4G17230 60.757 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr2g3093 GRAS 5.7e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3093 - - gmx:100792931 781.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g3093 2 35054710 35057539 Tpr7g2560 7 32841647 32845394 PCT