Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3083 ATGAAGCTCCACTACCTTAACTCACTGTTTCTTCTTGTGATCATCTTGGATCTAAGTACCAATATCTATGGTCTCTCATCATCACAACTCGTGCCCAAAAAAATATTGAAGCCATTATTACCACCTCCTGAAGCCTTGCTTTCAATTGGTCACTATCATGGAACATGTCCAGATGCTGAAGGCATTATCTCACAAAAAGTTGCTGCTTGGATTAAGAAGGACCCTACCTTGGCCCCATCCATCATCCGTTTGCATTTCCATGATTGTGCCATCAGAGGATGTGATGCATCAATTTTGCTTAACCACTTAGGGAGTGAGAGAAAAGCTTTTGAGAGTAGATCCTTGAGAGGTTTTCAATTGATTGATGAGATCAAGGTTGAGCTTGAGAAGAGGTGTCCTAGAACAGTGTCATGTGCTGACATTCTCACAGCTGCTGCAAGAGATGCAACAATTTTAGCTGGAGGACCATTTTGGGAAGTCCCATTCGGACGAAAAGACGGCAAGATTTCAGTAGCCAAAGAAGCAAATTTGGTTCCACAAGGACATGAAAACATAACAGGTTTGATTGGTTTTTTTCAAGAAAGAGGACTTGACATGCTTGATTTGGTTACTCTCTCAGGCTCACACACAATTGGAAGAAGCACTTGTTATTCTGTTATGAATAGAATTTACAATTTCAATGGAACTGGTAAACCTGATCCTTCACTTAGTATCTATTACTTGAAGATGTTAAGGAAAAGATGTAAAAAAGATTTAGATTTGGTGCACCTTGATGTTATAACTCCTAGGACTTTTGACACTACATATTACACAAACCTTAAGAGGAAAGTTGGTTTGTTGTCAACAGATCAATTGCTGTTTTCAGATGTAAGGACAGGTCCTTTTGTGGAAGCATTTGCAACACAACCTTTTCTTTTTACTAGTCAATTTGCTGTGTCAATGGTGAAGCTTGGGAATGTTCAAGTTTTGACTAGGCCTAATGAAGGTGAAATCAGAGTCAATTGCAATTATGTCAATCATGTTTGA 1026 0.3899 MKLHYLNSLFLLVIILDLSTNIYGLSSSQLVPKKILKPLLPPPEALLSIGHYHGTCPDAEGIISQKVAAWIKKDPTLAPSIIRLHFHDCAIRGCDASILLNHLGSERKAFESRSLRGFQLIDEIKVELEKRCPRTVSCADILTAAARDATILAGGPFWEVPFGRKDGKISVAKEANLVPQGHENITGLIGFFQERGLDMLDLVTLSGSHTIGRSTCYSVMNRIYNFNGTGKPDPSLSIYYLKMLRKRCKKDLDLVHLDVITPRTFDTTYYTNLKRKVGLLSTDQLLFSDVRTGPFVEAFATQPFLFTSQFAVSMVKLGNVQVLTRPNEGEIRVNCNYVNHV* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3083 341 PRINTS Plant peroxidase signature 56 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 80 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 116 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 135 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 154 169 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 256 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 272 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 Gene3D Peroxidase, domain 2 179 317 - -
Tpr2g3083 341 SUPERFAMILY Heme-dependent peroxidases 47 339 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 ProSitePatterns Peroxidases active site signature. 78 89 IPR019794 GO:0004601
Tpr2g3083 341 Pfam Peroxidase 64 301 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Tpr2g3083 341 Gene3D - 50 339 - -
Tpr2g3083 341 CDD secretory_peroxidase 48 338 IPR033905 GO:0004601|GO:0042744
Tpr2g3083 341 PANTHER PEROXIDASE 25-RELATED 30 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PANTHER PEROXIDASE 30 338 - -
Tpr2g3083 341 ProSiteProfiles Plant heme peroxidase family profile. 46 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Haem peroxidase superfamily signature 78 92 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Haem peroxidase superfamily signature 136 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Haem peroxidase superfamily signature 154 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr2g3083 341 PRINTS Haem peroxidase superfamily signature 258 273 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3083 Tpr-Chr2 34980112 34981844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3083 42 339 Peroxidase AT1G30870 50.000 1.58e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3083 K00430 - gmx:100792775 567