Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3082 ATGGGCAGTAATGAGGCGCAACAGTTATTGCTTTCAAATTCAATGGAACATTCTCATCTCAATGAGAAGAGTGACCTTCTTCAGAGAAGAAGACCGCGGCGTGGCGGCACTTCAGAGACAGATATCAATATGCCGCAAGAACAGAATGGTGTCCTCCAAACCCCTTTACTACCTCAATGTATAGATGAAAAACAAGAAGCAGAATTTAATTTCAGGCCAGTGTTTTTGTGTTTAGCAGCTTACCTAGGTACAGGTACCTTATGTTTCTTTCTCGCAAGTTACCAAATTCAGGGCATAAAAACAAATGGATTTCTTGATGCCCTTTATTTCTGTGTTGTGACAATGACTACTGTTGGATATGGAGATCTTGTTCCTAATAGCACTATAGCAAAATTACTTGCTTGCATTTATGTCTTCGCTGGTATGGCTCTAGGTGGCTTAATTCTTAGCAAAGCAGCCGATTACATTGTTGAAAAAGAAGAAATATTTGTTGTTAAAGCCATGCACAAAGCTGAAAAATTTGGTCCAGAAGAAATTTCTAAAGAACTTGGAACTAATAAAACCAAATACAAGTTTGTGCTAGCAGCATCTATTTTTCTTGTGCTCATGATTGTAGGGACTGTTTTTCTGTATTTTATTGAAAAACTAGATTTTGTGGATGCACTCTATTGTGTTTGTTCCACAGTCACTACTTTAGGTTATGGAGATAAGAGCTTCTCAACTGCTGCTGGTAGGACTTTTGCTGTGTTTTGGATATTGAGCAGCACCATCTGCTTGGCTCAGTCTTTTGCATATCTTGCTGAACTTTATACTGAAGATAGACAAAGATCACTTGTAAAAATGGTTCTTGCGCGAAAATTGTCACTCCGTGATCTTGAGGCAGCAGATCTTGATGGAGACAAAGCTGTCAGTGCTGCAGAGTTCGTTGTATACAAGTTGAAAGAAATGGGAAAGATCAACCAAGAAGATATTACAGCTGTGATGGAGATTTTTAGAAAACTAGACTTTGATCAATCAGGAACTCTGACTGAAGCTGATATCAGAAATCCTGAATTCTAA 1059 0.3843 MGSNEAQQLLLSNSMEHSHLNEKSDLLQRRRPRRGGTSETDINMPQEQNGVLQTPLLPQCIDEKQEAEFNFRPVFLCLAAYLGTGTLCFFLASYQIQGIKTNGFLDALYFCVVTMTTVGYGDLVPNSTIAKLLACIYVFAGMALGGLILSKAADYIVEKEEIFVVKAMHKAEKFGPEEISKELGTNKTKYKFVLAASIFLVLMIVGTVFLYFIEKLDFVDALYCVCSTVTTLGYGDKSFSTAAGRTFAVFWILSSTICLAQSFAYLAELYTEDRQRSLVKMVLARKLSLRDLEAADLDGDKAVSAAEFVVYKLKEMGKINQEDITAVMEIFRKLDFDQSGTLTEADIRNPEF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3082 352 PRINTS Two pore domain K+ channel signature 113 141 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr2g3082 352 PRINTS Two pore domain K+ channel signature 230 239 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr2g3082 352 MobiDBLite consensus disorder prediction 18 45 - -
Tpr2g3082 352 ProSitePatterns EF-hand calcium-binding domain. 335 347 IPR018247 -
Tpr2g3082 352 SUPERFAMILY EF-hand 292 349 IPR011992 -
Tpr2g3082 352 Gene3D - 284 350 - -
Tpr2g3082 352 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 18 347 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr2g3082 352 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 18 347 - -
Tpr2g3082 352 SUPERFAMILY Voltage-gated potassium channels 185 285 - -
Tpr2g3082 352 Gene3D - 181 279 - -
Tpr2g3082 352 Pfam Ion channel 198 270 IPR013099 -
Tpr2g3082 352 Pfam Ion channel 77 157 IPR013099 -
Tpr2g3082 352 Gene3D - 54 180 - -
Tpr2g3082 352 SUPERFAMILY Voltage-gated potassium channels 71 158 - -
Tpr2g3082 352 MobiDBLite consensus disorder prediction 18 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3082 Tpr-Chr2 34976009 34978977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3082 53 347 Ion Channels AT5G55630 59.322 3.36e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3082 K05389 - gmx:100799492 513.457