LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g3067	ATGTCGGCCAAGTCAACGGAGACCTTGCAGCACCATTCCCAGTACTCATCATCCTCCCAAATTATGTTCAACCACAACTACGCCACCGCCGGCATGTGTGAGATCACAGAGGAGGAAGAAGAAGTCCAGACAACCATCAACCACCACCACCAGCTTGATAATGAAATTGAAGAAGAAGAGTGTGTTTATGTGGCAGTTGGTAAAAGTGATACAAGCATGGAAGCTCTCTCATGGACACTCAACAACTTGTTCACTCATCACTCTACCAATACCATGCTCTATCTCATACATGTTTTCCCACAAATCAAACACATTCCTCATCCACTGGGAGTAGGAATGATTGCAAGGAATCAAGTGAGTGCAGAGCAGGTGGAGATTTATATGGACCAAGAAAGAGACAAGAGGAGACAACTCCTTCACAAGTTCCTCCATTCTTGCTCTATTTCTAAGGTTAAGGTGGACACCATCCTAATAGAAAGTGACTTGGTTGCTAAGGCCATCCTTGATCTTATTCCCATTCTTCAAATCACTAATTTAGTCATTGGTGCCAATAAATCCAATATAAGAAAATCAAGATCAAAGAAAGGAAATGGTGGTGTTGCTGATCAGGTAGTGCAGAATGCACCACAAAATTGCAAGGTTAGAGTTATTTGTGAAGGTAAGGAAGTGAATGAGCAAATGATGATGATGTCACAGTTACCCTCTCCTCAGATAATTACCACTACAAACTCTGCTAACAATGATAATTCTGTGAACACTAAAGAAAATGATTCTGTTTTATGTGTTTGTTTCAAGCCAAAGTTTAAATAA	810	0.4062	MSAKSTETLQHHSQYSSSSQIMFNHNYATAGMCEITEEEEEVQTTINHHHQLDNEIEEEECVYVAVGKSDTSMEALSWTLNNLFTHHSTNTMLYLIHVFPQIKHIPHPLGVGMIARNQVSAEQVEIYMDQERDKRRQLLHKFLHSCSISKVKVDTILIESDLVAKAILDLIPILQITNLVIGANKSNIRKSRSKKGNGGVADQVVQNAPQNCKVRVICEGKEVNEQMMMMSQLPSPQIITTTNSANNDNSVNTKENDSVLCVCFKPKFK*	270

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g3067	269	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	63	214	-	-
	Tpr2g3067	269	Gene3D	HUPs	55	229	IPR014729	-
	Tpr2g3067	269	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	13	268	-	-
	Tpr2g3067	269	CDD	STK_N	62	220	-	-
	Tpr2g3067	269	PANTHER	ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN	13	268	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g3067	Tpr-Chr2	34863277	34865817	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g3067	59	226	U-box Gene Family	AT1G01680	29.070	1.65e-11	61.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g3067	-		-	gmx:100527773	283.493