Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3065 ATGGCATCACCTTCTTTACCCTGTCCTCTAATCGAAAGAACAAGACCAATATGGCAATATCCACTGCACAAGTTGACGTCTGGACAAAGTAAATGCTATATGATGCCAACCGAGAAGAAGCATGATGATGATGATGAGTGTTTGCACTACTATGATCATAAATCCGATGAATCCGGTCGCGGTTGTGGTTGCAGTTTTATTGGGTTCAAGAAAAGTCAAGTGTTTGATTACAATTTCAGTAGGGAGATAGAAGAAGATGATGATGGAGATTCAGATGAAGAGCTATTTGAGATAAATCTGAAGAAGTTGGAAGCATTGGATTCAATAAGAGAAGAAGATGATGAGTATGAGAGCAGTAGTACTAGTACTGTGTTCTCTCTTGATATCCATAATGATAAATTAGAAGATGTTGTTTATGTAGCAGTTGGAGAAAGTAGTTGTTGTTCAAGTATGGAAGCACTTTCATGGGCCTTGAAACACTCTGTCACACCTAATTCTACTATTGTCTCTCTCGTACATGTTTTCCCTCAAGTCAAGCTAATTCCAACTCCATTGGGAAAAATGCCAAGGGCTCATGTAAATGAAGAGTATGTTAACCTCTGCTTGACGCAAGAGAAAAGCAAGAGGAAAATACTCCTTCAAAAGTTCATTGACCTATGTGTTGATTCAAAGGTTAAGGTGGAGGTGTTGCTTATTGAGGGTGACAACGTTGCTAAAGCCATTGTGGACCTTGTAGGGAATCTTAATATAAGGAAATTGGTGATTGGAACTACCCTATCTAATCTAAGAAAACATGTTTCAAGAAGACAAAATTCGATTGCGGACATGGTGTTAAAAACTGTACAAGAAAGTTGTGATGTCAAAATCATATGTAAAGGAAAAGAAGTGATCGATCAGATGATTAATGGCTGCACTTCACAACACTCCAAAGACAATACAAGTTCTAGAGTTTCCCATAAAGATTGGAGTGCTTTCAATCTTGGCATAGGAATTGGCATATGA 1002 0.3812 MASPSLPCPLIERTRPIWQYPLHKLTSGQSKCYMMPTEKKHDDDDECLHYYDHKSDESGRGCGCSFIGFKKSQVFDYNFSREIEEDDDGDSDEELFEINLKKLEALDSIREEDDEYESSSTSTVFSLDIHNDKLEDVVYVAVGESSCCSSMEALSWALKHSVTPNSTIVSLVHVFPQVKLIPTPLGKMPRAHVNEEYVNLCLTQEKSKRKILLQKFIDLCVDSKVKVEVLLIEGDNVAKAIVDLVGNLNIRKLVIGTTLSNLRKHVSRRQNSIADMVLKTVQESCDVKIICKGKEVIDQMINGCTSQHSKDNTSSRVSHKDWSAFNLGIGIGI* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3065 333 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 54 321 - -
Tpr2g3065 333 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 140 265 - -
Tpr2g3065 333 Gene3D HUPs 133 298 IPR014729 -
Tpr2g3065 333 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 54 321 - -
Tpr2g3065 333 CDD STK_N 137 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3065 Tpr-Chr2 34849631 34852874 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3065 134 293 U-box Gene Family AT2G45910 28.659 6.82e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3065 - - pvu:PHAVU_003G088000g 303.523