Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3057 ATGATATATTCTTATACAAGGAATATCAATGGCTTTGCTGCAATCCTCGAAGAGAAAGAAGCTGCGAGTATTGCAGAGCATCCAGAGGTTGTTTCAGTGTTGTTAAACAGAGGAAGAAACTTACACACAACACACTCGTGGGAGTTCATGTCAATGGAATACAATGGTGTTGTTCCTTCTGAGTCACTCTTTAGAAAAGCCAGATACGGTGAAGATGTTATAATCGGGAACCTTGACTCTGGTGTATGGCCAGAATCTCCGAGCTTTAGAGATGAGGGGATAGGTCCCATTCCATCAAGGTGGAAAGGAAAATGTCCGACCACTGACTTCCGTTGCAACAGGAAACTGATAGGAGCAAGGTACTTCAACAAAGGCTATTTGGCCTATGCAGGGCCAGCAGCAACACAAAACCACACGCATAACACCGTACGAGACTATGAAGGTCATGGATCTCACACATTGTCAACATTAGGAGGAAACTATGTTTCTGGAGCTAATGTTTTTGGTTTTGGCAATGGAACTGCCAAAGGTGGTTCTCCAAAAGCCAGAGTTGCTACTTACAAAGTCTGTTGGCCAAAAATTGATGACGGTGGATGTTTTGATGCTGATATCATGGCAGCCTTTGATATGGCTATTCATGACGGAGTAGATGTTCTTTCCCTTTCTCTTGGATCTGTTGCTGTTGATTACTTTAATGATGGCCTTTCAATTGCTGCATTTCATGCTGTTAAGAAAGGTATCACTGTATTGTGTTCAGCTGGAAATAGTGGACCAACACCTGGAACTGTTACAAATATTGCACCTTGGATATTAACTGTTGCTGCAAGCACCTTAGATAGAGAGTTTGCTTCTGGTGTTGAACTCTATAATGGACAAAGCTTTAGGGGATCAAGCCTTTCTGGAGCTTTGCCAGAAAACAAGTTTTACCCACTCATTACTGCTGCCGATGCAAAATTGGCAAATGCATCTGTAGAAAATGCTACCCTATGCTATAGAGGAACAATTGACCCTGAAAAAGCAAGGGGCCGCATCTTAGTTTGTCTTAGAGGTATTTTTGCAAGAGTGGTAAAGAGCCTTGTTGCTTTTGAGGCTGGAGCAGTTGGAATGATTCTTTGTAATGACCAAGCTGATGGCAATCAGCTCTTTGCCGATCCTCATTTCCTTCCATCATCGCAAATCACTTATGAAGACGGTGTTGCTGTCTTTGCCTACATCAATTCAACCAAGAATCCGCTAGGATCTATTAATCCACCCATAACAAAGTTGAACACAAAGCCTGCTCCAAAAATGGCCGCTTTCTCCTCTAGAGGCCCTAACATAATCACACCAGAGATTCTCAAGCCAGATATAACTGCACCTGGTGTCAACATTGTTGCTGCCTACTCAGGAGGGATTAGCCCTTCAGAGATGGACTTTGATAAGCGCAGGATTCCCTTTATCACAATGTCTGGAACATCCATGTCATGTCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACTCTCCACCCTGACTGGAGTCCATCAGCTATTAAATCAGCAATTATGACAACCGCTAGGACAAGGGCCAACAATGCTAAACCAATCCTTGATGATAATAATGTGAAGGCAACACCATTTGCCTATGGCTCAGGTCACATTCGACCAAATCGTGCCATGGATCCTGGCTTGGTCTATGAGTTGAACATCAATGATTACCTAAACTTTCTTTGTTTCATTGGTTATAACCAGACACAGATTAGCATGTTCTCTGGCACTCATTATCATTGTAAGGATATAAACATCTTGGATTTCAACTACCCTACAATAACAATACCTCAACTCTATGGTTCAGTTACTTTGAGTAGGAAGCTGAAAAATGTTGGTCCACCAGGAACATACAAAGCAACCTTACGTGTACCAGCAGGAGTTTCCGTATCTGTGCAGCCAAATATCTTGAAATTTGACAAGATTGGTGATGAAAAGAGTTTTAATTTGACTGTTGAAGTTAAAAGATCAGGTTTGGCTACTGTCTTTGGAGGCCTAACTTGGTCAGACGGCAAACACTATGTTAGGAGTCCAATTGTAGTTGGAGGAGTTAAAGGTTAA 2088 0.4239 MIYSYTRNINGFAAILEEKEAASIAEHPEVVSVLLNRGRNLHTTHSWEFMSMEYNGVVPSESLFRKARYGEDVIIGNLDSGVWPESPSFRDEGIGPIPSRWKGKCPTTDFRCNRKLIGARYFNKGYLAYAGPAATQNHTHNTVRDYEGHGSHTLSTLGGNYVSGANVFGFGNGTAKGGSPKARVATYKVCWPKIDDGGCFDADIMAAFDMAIHDGVDVLSLSLGSVAVDYFNDGLSIAAFHAVKKGITVLCSAGNSGPTPGTVTNIAPWILTVAASTLDREFASGVELYNGQSFRGSSLSGALPENKFYPLITAADAKLANASVENATLCYRGTIDPEKARGRILVCLRGIFARVVKSLVAFEAGAVGMILCNDQADGNQLFADPHFLPSSQITYEDGVAVFAYINSTKNPLGSINPPITKLNTKPAPKMAAFSSRGPNIITPEILKPDITAPGVNIVAAYSGGISPSEMDFDKRRIPFITMSGTSMSCPHVAGVVGLLKTLHPDWSPSAIKSAIMTTARTRANNAKPILDDNNVKATPFAYGSGHIRPNRAMDPGLVYELNINDYLNFLCFIGYNQTQISMFSGTHYHCKDINILDFNYPTITIPQLYGSVTLSRKLKNVGPPGTYKATLRVPAGVSVSVQPNILKFDKIGDEKSFNLTVEVKRSGLATVFGGLTWSDGKHYVRSPIVVGGVKG* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3057 695 CDD PA_subtilisin_like 286 415 - -
Tpr2g3057 695 Pfam Peptidase inhibitor I9 2 42 IPR010259 -
Tpr2g3057 695 SUPERFAMILY PA domain 339 408 IPR046450 -
Tpr2g3057 695 ProSitePatterns Serine proteases, subtilase family, serine active site. 484 494 IPR023828 -
Tpr2g3057 695 Gene3D - 279 422 - -
Tpr2g3057 695 ProSiteProfiles Serine proteases, subtilase domain profile. 46 553 - -
Tpr2g3057 695 SUPERFAMILY Subtilisin-like 41 557 IPR036852 GO:0004252|GO:0006508
Tpr2g3057 695 PANTHER BNAC02G33520D PROTEIN 2 691 - -
Tpr2g3057 695 CDD Peptidases_S8_3 41 519 IPR034197 -
Tpr2g3057 695 Pfam PA domain 327 399 IPR003137 -
Tpr2g3057 695 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 42 IPR037045 -
Tpr2g3057 695 PRINTS Subtilisin serine protease family (S8) signature 70 89 IPR015500 -
Tpr2g3057 695 PRINTS Subtilisin serine protease family (S8) signature 145 158 IPR015500 -
Tpr2g3057 695 PRINTS Subtilisin serine protease family (S8) signature 483 499 IPR015500 -
Tpr2g3057 695 PANTHER PEPTIDASE S8 2 691 - -
Tpr2g3057 695 Gene3D - 570 692 - -
Tpr2g3057 695 Pfam Subtilase family 70 545 IPR000209 GO:0006508|GO:0008236
Tpr2g3057 695 Gene3D Peptidase S8/S53 domain 72 566 IPR036852 GO:0004252|GO:0006508
Tpr2g3057 695 Pfam Fibronectin type-III domain 597 690 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3057 Tpr-Chr2 34792552 34796997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3057 1 690 Subtilisin-like Serine Gene Family AT5G59810 63.022 0.0 898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3057 - - gmx:100808488 1090.87