Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3050 ATGGCAAGTGCAAGTGTTGTTGTTGGTGTTGGTGAAGCAGAAGAAGAAGAACACAATAATAAGCTGATTCTGTATTCATTTTGGAGAAGTTCATGTTCCTTCCGAGTCCGAATTGCTCTTAACTTTAAAGGCCTCAAATATGACTACAAACAAGTCAATCTCTTGAAGGGAGAACAATCTCATCCTGAGTTTCTCCAGCTCAACCCTGTTGGTTTTGTTCCTGTTCTTGTCGATGGCCCTGCTGTTATTTCCGACTCTTTCGCCATTATTATGTATTTGGAGGATAAGTACCCTCAACATCCTTTGCTCCCTACTGATATTCACAAAAGAGCAATCAATTTCCAGGCTGTCAGTATTGTTTCTTCATCAATACAACCTCTTCAAAACCTAAGTCTCCTGACGTACATAGAGGGAAAAGCTGGCCCTGATGAAAAACTTTCATGGGTCCAGAGTGTAATTAAAAAAGGCTTCACAGCTCTTGAAAAGCTATTGAAAGAACACACTGGGAGGTTTGCTACTGGAGATGAAGTTTTCATGGCAGATATATTTTTAGCACCTCAGATACACTCTGCATTTAAGAAATTCAACATTGACATGACTGAGTTCCCTACTCTATCAAGATTACACGAGACATATTATGAGGTCCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAACCAGATGCAGCAGGCTAG 696 0.4109 MASASVVVGVGEAEEEEHNNKLILYSFWRSSCSFRVRIALNFKGLKYDYKQVNLLKGEQSHPEFLQLNPVGFVPVLVDGPAVISDSFAIIMYLEDKYPQHPLLPTDIHKRAINFQAVSIVSSSIQPLQNLSLLTYIEGKAGPDEKLSWVQSVIKKGFTALEKLLKEHTGRFATGDEVFMADIFLAPQIHSAFKKFNIDMTEFPTLSRLHETYYEVPAFREALPENQPDAAG* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3050 231 CDD GST_N_Zeta 22 94 IPR034333 -
Tpr2g3050 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 20 101 IPR004045 -
Tpr2g3050 231 Gene3D - 105 231 - -
Tpr2g3050 231 PANTHER MALEYLACETOACETATE ISOMERASE 14 230 - -
Tpr2g3050 231 SFLD Glutathione Transferase (cytosolic) 23 211 IPR040079 -
Tpr2g3050 231 SUPERFAMILY Thioredoxin-like 20 104 IPR036249 -
Tpr2g3050 231 Gene3D Glutaredoxin 19 104 - -
Tpr2g3050 231 Pfam Glutathione S-transferase, C-terminal domain 142 218 IPR004046 -
Tpr2g3050 231 SFLD Main (cytGST) 23 211 - -
Tpr2g3050 231 SUPERFAMILY GST C-terminal domain-like 101 228 IPR036282 -
Tpr2g3050 231 Pfam Glutathione S-transferase, N-terminal domain 24 100 IPR004045 -
Tpr2g3050 231 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 14 230 - -
Tpr2g3050 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 106 231 IPR010987 -
Tpr2g3050 231 CDD GST_C_Zeta 108 226 IPR034330 -
Tpr2g3050 231 TIGRFAM maiA: maleylacetoacetate isomerase 23 229 IPR005955 GO:0003824|GO:0005737|GO:0009072
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3050 Tpr-Chr2 34737620 34741776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3050 21 229 Glutathione S-transferase Gene Family AT2G02380 62.679 2.26e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3050 K01800 - gmx:547590 338.961