Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3014 ATGGGTGGAAGAATAGAATGGGTGAAGGGCAAAATGGTTGGATGTGGATCTTTTGGCAGTGTTCATCTAGCCATGAATAAATCGAACGGTGGACTTTTCGTAGTGAAAACATCAGATTCAGAGGTAGGACATGATGCTCTAAAGAACGAGGTGAATATACTAAATAGTTTAAATAATTCATCACCCTATATTGTCCAATGTTTAGGGACAGAGTATGATGATGATGATGATAAGAAAGTAGTGAATGTTTTCATGGAATATATGGCCGGGGGTAGTTTGGCTGACGTGTCGAACAAATTTGGTGGTTCATTAGATGAAGATATTGTACGTTTGTATACTAGACAAATTCTCCTTGGGTTATATGATCTTCACAAACATGGAATTGTGCATTGTGACCTTAAGTGCAAAAATGTGCTTTTGGCCTCTTCTGGGAACGTCAAGCTGGCTGATTTAGGGTGTGCAAAAAGGGTAGAGAACAAAGCATCATGTATTAATCTTACTAATGGTGGCACTCCTCTATGGATGGCTCCTGAAGTATTATTAAATGGTGATGAGAAAGTTGTCGATTTTGCTGCAGATATATGGTCTTTGGGGTGTACTGTTATTGAAATGGCCACCGGCAGGCCTCCTTGGGCTGACATTTCAAATCCAATTGCTGCTATGTTTAAGATTGCTCGCGGTGATGAGATACCTCAATTTCCACTTCATTTCTCTCGGGAAGGTTTCGATTTCTTGAGGAGGTGTTTGGTGAGAGATCCCAGTAAGAGGCCTACCGCACAGGAGTTACTTAACCACCCATTTATTATTTCAACTAATTTAACTCATCACAAACACTACTCTGCTTCCTCACCTGCAGCTGTTTTGGATGTTCATCAATTTGAGTATACCGATGACGACGATGACGACGAAGAATTATTACAAAGCCCAATTACAGGACGATTGAACCTGTTCTCTTCCACCACAAATGAGTTTGTGTCCCCACAAGGAACAACAATGTGGGAACTGGAAGATGGTGCATCAGGGAATCATTGGATCACTGTTAGATCAAGGGATCAATAA 1059 0.4089 MGGRIEWVKGKMVGCGSFGSVHLAMNKSNGGLFVVKTSDSEVGHDALKNEVNILNSLNNSSPYIVQCLGTEYDDDDDKKVVNVFMEYMAGGSLADVSNKFGGSLDEDIVRLYTRQILLGLYDLHKHGIVHCDLKCKNVLLASSGNVKLADLGCAKRVENKASCINLTNGGTPLWMAPEVLLNGDEKVVDFAADIWSLGCTVIEMATGRPPWADISNPIAAMFKIARGDEIPQFPLHFSREGFDFLRRCLVRDPSKRPTAQELLNHPFIISTNLTHHKHYSASSPAAVLDVHQFEYTDDDDDDEELLQSPITGRLNLFSSTTNEFVSPQGTTMWELEDGASGNHWITVRSRDQ* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3014 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Tpr2g3014 352 ProSiteProfiles Protein kinase domain profile. 7 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3014 352 SMART serkin_6 7 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3014 352 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 6 349 - -
Tpr2g3014 352 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE 6 349 - -
Tpr2g3014 352 ProSitePatterns Protein kinases ATP-binding region signature. 13 36 IPR017441 GO:0005524
Tpr2g3014 352 Pfam Protein kinase domain 9 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g3014 352 SUPERFAMILY Protein kinase-like (PK-like) 7 279 IPR011009 -
Tpr2g3014 352 Gene3D Transferase(Phosphotransferase) domain 1 6 309 - -
Tpr2g3014 352 CDD STKc_MAPKKK 6 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3014 Tpr-Chr2 34371935 34373002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g3014 7 289 MAP Kinase Kinase Kinase AT5G55090 45.139 4.23e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Tpr2g3014 Pkinase 2e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3014 K20716 - mtr:MTR_2g005290 515.768