Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g3004 ATGTTGATGGCTATTCAATTTCGAGTGAGGGAAAGCATCCTAGAAAACCTAGTACCTCTGCTTATGGTTCTAATGAGAAACAAGTTTGGGTCCAAAAAGCTAGTTCTGGGACCTAGATTATTTAGATTGATATTATCAACCATGGATTTACCAACAATTGACGTAGACCTTGAAGTACCTAAAAAGATTGAAGATGAAAAGGAGGGAGATCCTTTATTCCATTGTAGTCTTTGTGATACAGAAGTAATTCACAAGTTGGCTCAAATGTTCCTTCCAGGATTAGCCTCAGCTTGTGTCGATAACACAACAGGAGGTCTTTTCAAGACTCCTGGTTCAGTTGCTGTTGATTTGAGAAGGGAAATGATTGATTATCTAACCTTGAGAACTAAATCTTTTGTTGCTGAGTCTATTATCTTGGAAAATGGCGAAGCATCTGACCATCCTTTCGACATCATTTCTAATCTCGTTGACGACTTTGCAAGTTCAAAGAGGAATTTTTTTAGCCGTGTTTCGGTATGGTTGTTGAGTGAAAAGAGAGAAGATAAAATTGATGATTTCATCCAAGAGATAGACATGAACGGTTTTTGGACGCTTGATAGAAGAGAAATAGTTGCAGAAACTTTGCTAAAAAATGTTGACTTTCATAATTCATTTCATTGCACCATGAGCTTTAGTTCTTCTCAAGACCTTGCCGATCATGTTTTTACTTGTAACTTTAGACCTATGATTTGCCAAAATCAAGGATGCGATACTAAATTTTGTGCAAGTCATTTGGAAAAGCATGATTCAGTATGTCCTTTCAAGATAATTTCATGTGAACAAAAGTGTTCAAATAACAATATTATGAGACGGGATATGGATAGACATTGTATAACCGTTTGTCCGATGAAGCTGGTAAATTGTCCTTTTCACGCAGTGGGTTGTCGGTCGGCTGTTGCACAGTGTATGATTGAAAAACATTGTTTGGATGACTTACGATCTCATGTGTGGCACTTGCTTAAAGCTGTCTACAAGGAAGCATTTGGGGATGATCTTCAACGACGAGTCAACCAAATTGTACAGGTCAATCACTGTATGTATGTTAAGATTAATTAA 1095 0.3717 MLMAIQFRVRESILENLVPLLMVLMRNKFGSKKLVLGPRLFRLILSTMDLPTIDVDLEVPKKIEDEKEGDPLFHCSLCDTEVIHKLAQMFLPGLASACVDNTTGGLFKTPGSVAVDLRREMIDYLTLRTKSFVAESIILENGEASDHPFDIISNLVDDFASSKRNFFSRVSVWLLSEKREDKIDDFIQEIDMNGFWTLDRREIVAETLLKNVDFHNSFHCTMSFSSSQDLADHVFTCNFRPMICQNQGCDTKFCASHLEKHDSVCPFKIISCEQKCSNNNIMRRDMDRHCITVCPMKLVNCPFHAVGCRSAVAQCMIEKHCLDDLRSHVWHLLKAVYKEAFGDDLQRRVNQIVQVNHCMYVKIN* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g3004 364 Pfam TRAF-type zinc finger 261 320 IPR001293 GO:0008270
Tpr2g3004 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 295 IPR013083 -
Tpr2g3004 364 ProSiteProfiles Zinc finger TRAF-type profile. 256 309 IPR001293 GO:0008270
Tpr2g3004 364 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 45 354 IPR043211 -
Tpr2g3004 364 SUPERFAMILY TRAF domain-like 220 274 - -
Tpr2g3004 364 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 45 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g3004 Tpr-Chr2 34301004 34303807 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr2g3004 zf-TRAF 2e-11 CL0389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g3004 - - gmx:100819268 523.087