Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2996 ATGATACCTTTTACCTTAATTGTTTTCACTCTGTTTTCCTCTGTTTTTGCTTCATCCTTGCTCAGTGATTTTCATGCTCTAGTCACACTTAGAGAAGGATTTCAATTCCCAAACCCAGTTATAAACACATGGAATACTTCCAATTTCACCTCAGTTTGTTCATGGGTTGGAATTCAATGCCACGAGGGTCGAGTCGTCTCGGTAGACTTAACAGATTTGAATCTGTTTGGCTCTGTTTCACCTTCAATTACATCACTTGATAAACTCACACACCTTTCCCTTGCAGGAAACAACTTCACAGGAACCATTCACATCACAAACTTAACCAACCTTCAATTTCTAAACATTTCCAATAACCAGTTCAGTGGTCACATGGATTGGAACTACTCCACCATGGAAAACCTTCAAGTTGTTGATGTCTATAACAATAACTTCACTTCCTTGCTTCCATTGGGACTAGTCAGTTTGAAGAAAAGCCTCAAATACTTGGATCTTGGTGGTAACTTTTTCTCCGGCGAAATACCGAAAAGCTATGGAAAATTTGTGTCTCTTGAGTATCTGTCACTAGCTGGAAATGATATTAGTGGGAAAATCCCTGGTGAGTTGGGGAATCTGAGTAACTTGAAAGAGATTTACTTGGGCTATTACAATTCTTATGAAGGTGGAATTCCAAAGGAGTTTGGAAAGTTAACAAATTTGGTTCACATGGATCTTTCAAGCTGTGATTTAGATGGTTCAATACCAAAAGAATTAGGTAACTTGAAAGAACTCAACACACTTTACTTGCACATAAACCAGCTTTCAGGTTCAATCCCAAAACAACTTGGTAACTTGACAAACTTGCTCTACCTTGACCTTTCAAGCAATACACTGACAGGTGAAATCCCTTATGAGTTCATCAACCTTAACCGTCTCAAGCTTTTCAATCTTTTCTTGAACAGGTTACATGGTTCTATACCTGACTACATTGCAGATTTTCCTGATTTAGACACACTTGGACTTTGGATGAACAACTTTACAGGTGAAATTCCACACAAACTTGGTCTTAATGGAAAGCTTCAAGGACTTGACTTATCCTCTAATAAACTCACTGGTGTCATTCCACCTCATCTTTGTTCCTCAAACCAGCTTAAGATTTTGATTCTTCTCAATAATTTTCTCTTTGGTCCCATACCTGAAGGCCTAGGAACATGTTACAGTCTCACTAGAGTGAGGTTAGGAGAGAATTACCTTAATGGTAGCATACCAAATGGTTTTCTTTACCTTCCTAAGCTAAATTTAGCAGAGTTGAAAAATAATTACTTATCAGGGGAATTGTCAGAAAATGGTAATAGTTCCTCTATGCCTGTTTGTTTAGAACAACTTGATTTGTCAAACAATGCCTTGTCTGGTCCTTTACCACATTCCCTCTCAAATTTCACTTCCCTTCAAATCCTTTTGCTTAGTGGAAACCAATTCTCAGGTCCAATTCCAAGTTCAATTGGAGGATTAAATCAAGCGCTGAAGCTCGACCTTAGCAGAAACTCATTATCAGGTGAAATTCCGCCCGAAATTGGATTTTGTGTTCATCTTACCTACCTTGACATGAGTCAGAACAATCTCTCTGGCTCCATCACACCATTGATTTCCAACATCCGTATTTTGAATTACTTGAACTTGTCTAGAAACCATTTGAACCAAACCATCCCAAGATCAATAGGGACAATGAAAAGCCTCACAGTTGCTGATTTCTCATTCAACGAATTCTCCGGTAAATTGCCTGAGTCGGGTCAATTTGCATTCTTTAATGCTTCTTCATTCGCGGGCAATCCTAAACTATGTGGTTCTCTATTGAACAATCCATGTAAGCTGACAAGAATGAAATCCACACCAGGAAAAAGTTCTGCAGATTTCAAGCTGATATTCGCGCTAGGACTATTGATGTGTTCCTTCGTGTTTGCTATTGCAGCCATTATAAAAGCCAAGTCATTTAAAAAGAAAGGACCTGGTTCTTGGAAGATGACTGCTTTTCAAAAGCTCGAATTCACGGTTTCGGACATTCTCGAATGTGTTAAAGATGGTAATGTGATCGGAAGAGGAGGTGCAGGGATTGTTTACCATGGAAAAATGCCAAATGGAATGGAAATAGCAGTGAAAAAGCTACTTGGGTTTGGTGCAAATAGTCATGATCATGGTTTTCAAGCTGAAATTCAAACACTTGGAAACATAAGACACAGAAACATAGTTAGGCTACTTGCATTCTGTTCAAACAAAGAAACAAATTTGCTTGTGTATGAATACATGAGAAATGGGAGTTTAGGTGAGGCATTGCATGGGAAAAAAGGTGGATTCTTGAGTTGGAATTTTAGGTACAAAATTTCTATTGACTCTGCTAAAGGACTCTGCTACCTTCACCATGATTGTTCTCCTTTGATCCTACATAGAGATGTGAAATCCAACAACATTTTGTTAAGTTCAAATTTTGAAGCACATGTGGCTGATTTTGGTCTTGCAAAGTTCTTGGTTGATGGTGCTGCATCAGAGTGCATGTCTTCAATTGCAGGCTCCTATGGCTACATTGCACCAGAATATGCTTATACATTGAGAGTGGATGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTTCTACTAGAGCTTCTAACAGGGAAGAAACCAGTAGGTGATTTTGGTGAAGGTGTGGATCTTGTACAATGGTGCAAAAAAGCAACCAATGGAAGAAGAGAAGAGGTTGTGAACATAGTTGATTCAAGACTTATGGTAGTGCCAACAGAAGAAGCCATGCACATGTTCTTCATTGCCATGTTATGCTTAGAAGAAAACAGTGTACAAAGACCAACCATGAGAGAAGTTGTTCAGATGCTTTCTGAATTTCCTAGATCATCAATGTCATCATCTGATCAACAATCTTCTTCTTCTTCTTCTTCTAGTCATCCACCAAGCAAAAAGTTAATTCAGAATGATAAATTACCTTGTCCTCCTACTTTTAAACAAGACCTTTTGGTTTGA 3006 0.3842 MIPFTLIVFTLFSSVFASSLLSDFHALVTLREGFQFPNPVINTWNTSNFTSVCSWVGIQCHEGRVVSVDLTDLNLFGSVSPSITSLDKLTHLSLAGNNFTGTIHITNLTNLQFLNISNNQFSGHMDWNYSTMENLQVVDVYNNNFTSLLPLGLVSLKKSLKYLDLGGNFFSGEIPKSYGKFVSLEYLSLAGNDISGKIPGELGNLSNLKEIYLGYYNSYEGGIPKEFGKLTNLVHMDLSSCDLDGSIPKELGNLKELNTLYLHINQLSGSIPKQLGNLTNLLYLDLSSNTLTGEIPYEFINLNRLKLFNLFLNRLHGSIPDYIADFPDLDTLGLWMNNFTGEIPHKLGLNGKLQGLDLSSNKLTGVIPPHLCSSNQLKILILLNNFLFGPIPEGLGTCYSLTRVRLGENYLNGSIPNGFLYLPKLNLAELKNNYLSGELSENGNSSSMPVCLEQLDLSNNALSGPLPHSLSNFTSLQILLLSGNQFSGPIPSSIGGLNQALKLDLSRNSLSGEIPPEIGFCVHLTYLDMSQNNLSGSITPLISNIRILNYLNLSRNHLNQTIPRSIGTMKSLTVADFSFNEFSGKLPESGQFAFFNASSFAGNPKLCGSLLNNPCKLTRMKSTPGKSSADFKLIFALGLLMCSFVFAIAAIIKAKSFKKKGPGSWKMTAFQKLEFTVSDILECVKDGNVIGRGGAGIVYHGKMPNGMEIAVKKLLGFGANSHDHGFQAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGGFLSWNFRYKISIDSAKGLCYLHHDCSPLILHRDVKSNNILLSSNFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGKKPVGDFGEGVDLVQWCKKATNGRREEVVNIVDSRLMVVPTEEAMHMFFIAMLCLEENSVQRPTMREVVQMLSEFPRSSMSSSDQQSSSSSSSSHPPSKKLIQNDKLPCPPTFKQDLLV* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2996 1001 Pfam Leucine Rich repeat 521 536 IPR001611 GO:0005515
Tpr2g2996 1001 Pfam Leucine Rich repeat 278 294 IPR001611 GO:0005515
Tpr2g2996 1001 MobiDBLite consensus disorder prediction 958 982 - -
Tpr2g2996 1001 Gene3D Ribonuclease Inhibitor 174 269 IPR032675 -
Tpr2g2996 1001 SUPERFAMILY RNI-like 67 388 - -
Tpr2g2996 1001 Gene3D Ribonuclease Inhibitor 21 173 IPR032675 -
Tpr2g2996 1001 Gene3D Ribonuclease Inhibitor 324 622 IPR032675 -
Tpr2g2996 1001 PANTHER UNNAMED PRODUCT 8 963 - -
Tpr2g2996 1001 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 8 963 - -
Tpr2g2996 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Tpr2g2996 1001 Pfam Protein tyrosine and serine/threonine kinase 687 954 IPR001245 GO:0004672|GO:0006468
Tpr2g2996 1001 Gene3D Transferase(Phosphotransferase) domain 1 761 978 - -
Tpr2g2996 1001 SUPERFAMILY L domain-like 351 608 - -
Tpr2g2996 1001 MobiDBLite consensus disorder prediction 958 1001 - -
Tpr2g2996 1001 Gene3D Phosphorylase Kinase; domain 1 649 760 - -
Tpr2g2996 1001 Gene3D Ribonuclease Inhibitor 270 323 IPR032675 -
Tpr2g2996 1001 ProSiteProfiles Protein kinase domain profile. 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2996 1001 SUPERFAMILY Protein kinase-like (PK-like) 675 954 IPR011009 -
Tpr2g2996 1001 Pfam Leucine Rich Repeat 159 177 IPR001611 GO:0005515
Tpr2g2996 1001 SMART LRR_typ_2 278 302 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 351 374 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 181 205 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 473 497 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 545 569 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 132 155 IPR003591 -
Tpr2g2996 1001 SMART LRR_typ_2 230 254 IPR003591 -
Tpr2g2996 1001 Pfam Leucine rich repeat N-terminal domain 22 60 IPR013210 -
Tpr2g2996 1001 SMART serkin_6 684 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2996 Tpr-Chr2 34247856 34253661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2996 17 986 Receptor kinase-like Gene Family AT5G65700 56.491 0.0 1079
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr2g2996 PK_Tyr_Ser-Thr 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2996 - - tcc:18607145 1478