Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2982 ATGGAACTATCATCAGATTTGCAACAAAACAATAACAAGAAGCAGCAGAAAAGAGGCACCACCACACATCCCCACCACCAACAACAAGAATCATTATCTCCACCACCTTCAAATTCTCATTCACAACAACAACAACAACACCATCTCGTGGTCCCTTTTGATGGAAGACCATCACCTTTCATTATGGGCTCCATCTCCACCAACAACACTAATTCATCTCCATCCAATTCATCTTCTTCCTCTGCTTCAGCTTCTGCAATTGACGCTTCTCTTGCTATTGCTACCAGATCTGAACCTCATTCCAACAATAACAACCAAATTCAACAATTCTCTTCTTCCACCACTACTGCCGTTGCTGTTGCTAATCCTCCTAAACGATCCACCAAGGACAGACACACTAAAGTCGACGGTCGTGGCCGGAGAATTCGAATGCCGGCGACATGTGCAGCAAGAGTTTTTCAGTTGACCAGAGAATTAGGTCACAAATCAGACGGTGAAACAATTGAGTGGCTTCTTCAACAAGCGGAGCCGGCGATAATCGCAGCCACCGGAACCGGAACAATTCCCGCGAATTTCTCGACGCTCAACGTTTCACTCAGAAGTAGCGGCTCAACTCTGTCGGCGCCGCCGTCGAAATCAGCTCCTCATAGTTTTCACAGCGCGCTTGCACTGGCTCATCATCCTTATGAAGAAGCTGCGTACCAACACGCGCCACTGTTAGGGTTTCATCCTCATCAACAACTCATGAACGCCGATCAAATCGGTGAAGCACTTTCGAATGAGAATTATATGAGAAAACGCTATAGAGAAGATCTTTTCAAAGACGATAACAACAACCAGAACAACGAAACTGGTGATGGTGATGGTTCTTCTTCTCCTAAAGGTTTCAAAACAAACCACCAACAAGATGGTACTATGGGAGAACAAGGTGAAGGTGGTGGTGGTGGAGCTTCTTCATCTTCTTCTTCTGCTTCTTCTGCTGGAAATTCTATTTCTGGACTTCTTCGACCACCGTCGAATATGTTACCGGCAACAGCCATGTGGGCCACGGCAGGGAGTGGAAACACAATATGGATGGTACCGGTGACTGGCGGTGGCGGAGCAACTGCGAATTCAGAGACAGTACAGACGCAAAACATGTGGCCTTTTAGTACTCATCTTAATAATCAACAATCTTCTCAACAACAAGGAACACCTTCGTCTCAGCTGCATTTCATGCCGAGGTTCAATGTTCCAACAGGTAATTCCGGTGGTAGTGGTGGTGTTGAATTTGAAGGTGGACGTGGTGGTGCAGGTGGTTTACAATTGGGTTCATCTGTGTATCATCAACCTTCGCCTTCACAGCATATTGGATTGGCAGTGTCTGATTCAAATTTGGGTATGTTGGCTGCTCTTAATGCTTATACAAGAGCTGCTGCTGGTCATCATTTCAATGTGGTCAACAATTCTTCATCTTCTTCTTCAGATCATCATCATCAACAACAACCTAGTCATCATCATCATCATCATCATCATGATCATGAGAGTGGAGAAGATGCTCCTAATAGTAATAACTCACAATGA 1563 0.4517 MELSSDLQQNNNKKQQKRGTTTHPHHQQQESLSPPPSNSHSQQQQQHHLVVPFDGRPSPFIMGSISTNNTNSSPSNSSSSSASASAIDASLAIATRSEPHSNNNNQIQQFSSSTTTAVAVANPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHSFHSALALAHHPYEEAAYQHAPLLGFHPHQQLMNADQIGEALSNENYMRKRYREDLFKDDNNNQNNETGDGDGSSSPKGFKTNHQQDGTMGEQGEGGGGGASSSSSSASSAGNSISGLLRPPSNMLPATAMWATAGSGNTIWMVPVTGGGGATANSETVQTQNMWPFSTHLNNQQSSQQQGTPSSQLHFMPRFNVPTGNSGGSGGVEFEGGRGGAGGLQLGSSVYHQPSPSQHIGLAVSDSNLGMLAALNAYTRAAAGHHFNVVNNSSSSSSDHHHQQQPSHHHHHHHHDHESGEDAPNSNNSQ* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2982 520 MobiDBLite consensus disorder prediction 482 520 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 1 47 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 109 136 - -
Tpr2g2982 520 PANTHER TRANSCRIPTION FACTOR TCP8 29 517 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 1 17 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 278 306 - -
Tpr2g2982 520 Pfam TCP family transcription factor 127 270 IPR017887 -
Tpr2g2982 520 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 517 IPR005333 GO:0003700
Tpr2g2982 520 MobiDBLite consensus disorder prediction 25 47 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 272 330 - -
Tpr2g2982 520 MobiDBLite consensus disorder prediction 314 330 - -
Tpr2g2982 520 ProSiteProfiles TCP domain profile. 128 182 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2982 Tpr-Chr2 34140642 34143165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2982 125 383 TCP Transcription Factor Family AT1G35560 49.434 2.03e-58 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr2g2982 TCP 3.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2982 - - adu:107482753 392.889