Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2979 ATGTTTGGAGCAGAGGCAATGGAACAAGGAAATTGCACATTATTTAGAGGACAAGATAAACCTCATTGTTGTAAGAAAGAGCCAGTTATTATTGATCTCATGCCTGGTGCACCATACAACATGCAATCTGCCAATTGTTGTAAAGGAGGGGTCTTAACATCATTGACACAAGATGTTACCAAACATGTTGCATCCTTTCAGATGAATTATATGAAATCATCAACCTCAATTTCAGAAACTTGGAACGTGACATGTACTTACTCACCGTTTTTAACATCATATACCCCAAAATGTTGTGTCTCCTTCTCTGCATTCTACCATAGCGACATTGTTCCTTGCCCTTTATGCAGCTGTAATTGCCAAGGACAACCAAGAGCAGATTGCATAGATTCTTATAAGACTTCAGTGTTGAAACTTCCACAAGCAAATGATGCAGAACCAGTTGTGAGGTGTTCACATCACATGTGTCCTATACGCGTTCATTGGCATGTAAAACAAAGTTATAGAGAGTATTGGAGGGTCAAGATCACAATCACAAATCTAAACATCATAAAAAACTATTCTCAATGGAATTTGGTTGTTTTACATCCCAATTTGCGAAATTTAACACAAGTTTTTAGTTTCAACTACCAACCTTTGCCAACTTATGGAAATTTCAATGATACAGGGATATTTTGGGGCCTAAAATACTACAATGACTTGCTGCTAGCACATGGTGAGGATGGGAATGTGCAAACAGAGTTGTTACTAAACAAAGATCAAGGAGAGTTCACCTTTAAAGAAGGATGGACTTTTCCGAGAAAAATTTCGTTTAATGGAGATGAATGTGTTATGCCATCTCCTGACCATTATCCAAGGCTTCCCAATTCATCTCATATTGCTACCAAAAGCCATCTCTTGTGTTTGTTCTTGATGTTACTATTAACAATATTGTTCTTATAA 942 0.3715 MFGAEAMEQGNCTLFRGQDKPHCCKKEPVIIDLMPGAPYNMQSANCCKGGVLTSLTQDVTKHVASFQMNYMKSSTSISETWNVTCTYSPFLTSYTPKCCVSFSAFYHSDIVPCPLCSCNCQGQPRADCIDSYKTSVLKLPQANDAEPVVRCSHHMCPIRVHWHVKQSYREYWRVKITITNLNIIKNYSQWNLVVLHPNLRNLTQVFSFNYQPLPTYGNFNDTGIFWGLKYYNDLLLAHGEDGNVQTELLLNKDQGEFTFKEGWTFPRKISFNGDECVMPSPDHYPRLPNSSHIATKSHLLCLFLMLLLTILFL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2979 313 Pfam COBRA-like protein 1 74 IPR006918 GO:0010215|GO:0031225
Tpr2g2979 313 PANTHER COBRA-LIKE PROTEIN 6 1 75 - -
Tpr2g2979 313 PANTHER COBRA-LIKE PROTEIN 6 74 308 - -
Tpr2g2979 313 PIRSF COBRA 1 79 IPR006918 GO:0010215|GO:0031225
Tpr2g2979 313 PIRSF COBRA 69 313 IPR006918 GO:0010215|GO:0031225
Tpr2g2979 313 PANTHER PROTEIN COBRA 74 308 IPR006918 GO:0010215|GO:0031225
Tpr2g2979 313 PANTHER PROTEIN COBRA 1 75 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2979 Tpr-Chr2 34124851 34126657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2979 1 311 COBRA Gene Family AT3G29810 49.859 2.89e-123 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2979 - - lang:109329241 467.233