Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2974 ATGTATTCATCTCTCTCTCTCTCTCTCTCACAGTATACAGTAGACACAGTAGTACAGTATGTGGTAGCTGGATTTGTTGGATCTTGGATGGAGAAGTACGAGCTGGTTAAGGATATAGGATCTGGTAATTTTGGAGTTGCCAGACTCATGCGCAACAAATCCACCAAACAACTCGTTGCCATGAAATACATTCAAAGAGGTCCCAAGATTGATGAGAATGTTGCTAGGGAAATAATAAACCATAGAAGTCTCCGTCATCCTAATATTATTCGATTCAAGGAGGTGGTTTTGACTCCTACACATCTTGGTATTGTTATGGAGTATGCTGCTGGTGGAGAGCTCTTTGAGCGAATTTGCAATGCTGGAAGATTCAGTGAAGATGAGGCTCGATATTTCTTCCAGCAGCTTATCTCAGGAGTTAGCTACTGTCACTCCATGCAAATTTGCCATCGGGACTTGAAGCTCGAGAACACTTTATTGGATGGCAGCCCAGCACCGCGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATAGCACCAGAGGTTCTTTCCCGTAGAGAATATGACGGAAAGTTGGCAGATGTATGGTCTTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGAGGATCCCAAAAATTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATTCCAGATTATGTTCACATAACTCAAGACTGTAGACATCTGCTGTCTCGCATTTTTGTGGCAAATCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCTAGAGAATTGACTGAAATGGCTCAAGCTGTTTACTACAGAAAAGAAAATCCAACTTATTCTCTTCAGAGCATTGAAGACATTATGAATATTGTTGAGGAAGCTAAAACCCAACCTCAGGCATCTAGGTCAATTGGAGGGTTTGGATGGGGAGGAGAAGAAGACTTTGATGAAACAAAAGAAGCAGAGGCTGAGGTGGAAGAAGATGAATATGAAAAGAGAGTCAAGGAGGCACAGGAAAGTGGAGAAATTCATGTCAACTAA 1143 0.4182 MYSSLSLSLSQYTVDTVVQYVVAGFVGSWMEKYELVKDIGSGNFGVARLMRNKSTKQLVAMKYIQRGPKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHITQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTYSLQSIEDIMNIVEEAKTQPQASRSIGGFGWGGEEDFDETKEAEAEVEEDEYEKRVKEAQESGEIHVN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2974 380 Coils Coil 354 374 - -
Tpr2g2974 380 CDD STKc_SnRK2 32 288 - -
Tpr2g2974 380 MobiDBLite consensus disorder prediction 335 380 - -
Tpr2g2974 380 SMART serkin_6 33 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2974 380 SUPERFAMILY Protein kinase-like (PK-like) 14 323 IPR011009 -
Tpr2g2974 380 Gene3D Transferase(Phosphotransferase) domain 1 109 297 - -
Tpr2g2974 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Tpr2g2974 380 PANTHER SERINE/THREONINE KINASE 31 374 - -
Tpr2g2974 380 ProSiteProfiles Protein kinase domain profile. 33 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2974 380 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 31 374 - -
Tpr2g2974 380 MobiDBLite consensus disorder prediction 360 380 - -
Tpr2g2974 380 Gene3D Phosphorylase Kinase; domain 1 21 108 - -
Tpr2g2974 380 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
Tpr2g2974 380 Pfam Protein kinase domain 33 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2974 Tpr-Chr2 34088336 34091838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2974 32 292 CBL-interacting serine-threonine protein kinases AT4G24400 43.333 3.39e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Tpr2g2974 Pkinase 1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2974 K14498 - gmx:100812259 646.351