Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2962 ATGGAGAAGATTGTTTTTTTTATGTTTATGTTTCTTAGCATAAACATGATGAGTATTTCAGCAGTTCCATCTACATGTCCTATGGACCTTAACTATGTCCTTAGAATACATTGGAATTCTTCTGCTTGTCAAAATTTTGACTCAAAAAAACAAGTAAACACATCAAGCACATGTTGCATATCACTTTTGTCACTTTTTGGAATAGGATTTGCACAACATCTTAAAGAAACTTCTCAATTCAATCTTCAAGACCTTCAAACTTCAATTTCATGCATGAATGATTTTCAATCAAAGCTTAATTCTTTATCACTTTCAAACAACCTTGCTAACTCTTGCTTTCACCCTCAACAATTTGTTATCTCTCGTAACTTTTGTGCAGGTATTGAAACTGTTCATGATTGGAATGAAAAGTTGGGTCAGAATACAAGTTTGAACACTGCTTGTAAACCAGATCTAACTGATCTTTCTCAGTGTGATGTGTGTTTAGCAGCTGGTTTACAGGTTAAGCAGAAGCTTGCTTCAATTGATGGTAATTCAGAAAATTCATTGAATTGTTTCTTACTTACAATTCTTTATGCTGCTGGAATTGTGAATGAGTTTGGACCTGAAAGTAATGGTGCTGTTACTTGTGCTTTTAGTGTACCTGTTTATTCACAAGTTGGTTCTGGTTCAAAGGGTCATCAGGGTCTTGTGTTTGGTTTAACAGGAGCTGGTGTTGCATTGTTTGTTATGTGTTCTTTGTTGGGTTTATATGTTTGGTTTGATAGAAAACGTATGAGGAAGCGAAAGCTTGAAACTTTTCAATTTGATTTTGATCCTGAGGAACAAGGTTCTAGGCGTAGACTAAGGCCTAATACAGGTTCAATTTGGTACAAAATTCAGGAACTTGAGAAAGCTACTGATAATTTTTCATCCAAAAATTTCATAGGGAGAGGTGGGTTTGGTTTGGTTTTTAAAGGAACTTTGGCTGATGGATCTGTTGTTGCTGTTAAGAGGGTTTTAGAATCTGATTTTCAAGGGGATGCTGAGTTTTGTAATGAAGTTGAGATTATTAGTAATCTTAAGCATAGGAATCTGTTGCCTCTTAGAGGTTGTTGTGTGGTTGATGATAATGAGAATTATGGTGATAAGGGAAGTCAAAGATATCTTGTTTATGATTATATGCCAAATGGAAACTTGGAAGATCATCTTTTTGTATCAAAGGATCCTCAAAAAGCAAACAAATCATTGACTTGGCCTCTTAGGAAAAACATTATTTTGGATGTGGCAAAGGGTTTGGCTTATTTGCACTACGGAGTTAAGCCTGCAATTTATCATAGGGATATCAAAGCAACCAATATACTACTTGATGAAGATATGAGGGCAAGAGTTGCTGATTTTGGACTTGCTAAACAAAGTAGGGAAGGTCAGTCTCATCTCACTACTAGAGTTGCCGGAACTCATGGATATTTAGCACCGGAATATGCGTTATATGGTCAACTGACTGAGAAGAGTGATGTGTATAGCTTTGGTGTGGTTGTTTTGGAGATAATGTGTGGGAGGAAGGCTCTTGATTTGTCTTCATCGGGATCACCACGAGCGTTCTTGATCACCGATTGGGCTTGGTCGTTGGTGAAATCGGGGAAAATAGATGAGGCTTTGGATGCTTCTCTTTTGAAAGACGATAATAATGCTAGTGCAAATCCTAAGAGCATAATGGAAAGGTATTTGCTTGTTGGAATTCTATGTTCTCATGTAATGGTTGCTTTAAGGCCAACAATTTCTGATGCTTTGAAGATGATGGAAGGTGATATCGAGGTTCCTCAAATTCCAGATAGGCCAATGCCTCTTGGACATCCTTCGTTTTATAATAATGATAGTAACTGCAACACTTTTAGCATATCCCCGGCATTAAGTGGCCTCAAATTGCAAGCTGGAGACATGCTCAGGTCCATTAGTGAGAGATGA 1947 0.3724 MEKIVFFMFMFLSINMMSISAVPSTCPMDLNYVLRIHWNSSACQNFDSKKQVNTSSTCCISLLSLFGIGFAQHLKETSQFNLQDLQTSISCMNDFQSKLNSLSLSNNLANSCFHPQQFVISRNFCAGIETVHDWNEKLGQNTSLNTACKPDLTDLSQCDVCLAAGLQVKQKLASIDGNSENSLNCFLLTILYAAGIVNEFGPESNGAVTCAFSVPVYSQVGSGSKGHQGLVFGLTGAGVALFVMCSLLGLYVWFDRKRMRKRKLETFQFDFDPEEQGSRRRLRPNTGSIWYKIQELEKATDNFSSKNFIGRGGFGLVFKGTLADGSVVAVKRVLESDFQGDAEFCNEVEIISNLKHRNLLPLRGCCVVDDNENYGDKGSQRYLVYDYMPNGNLEDHLFVSKDPQKANKSLTWPLRKNIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDEDMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALDLSSSGSPRAFLITDWAWSLVKSGKIDEALDASLLKDDNNASANPKSIMERYLLVGILCSHVMVALRPTISDALKMMEGDIEVPQIPDRPMPLGHPSFYNNDSNCNTFSISPALSGLKLQAGDMLRSISER* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2962 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Tpr2g2962 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 642 - -
Tpr2g2962 648 SUPERFAMILY Protein kinase-like (PK-like) 284 594 IPR011009 -
Tpr2g2962 648 CDD STKc_IRAK 309 596 - -
Tpr2g2962 648 Gene3D Phosphorylase Kinase; domain 1 274 387 - -
Tpr2g2962 648 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Tpr2g2962 648 Pfam Protein kinase domain 305 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2962 648 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 642 - -
Tpr2g2962 648 SMART serkin_6 303 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2962 648 Pfam SPARK 23 186 IPR043891 -
Tpr2g2962 648 ProSiteProfiles Protein kinase domain profile. 303 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g2962 648 Gene3D Transferase(Phosphotransferase) domain 1 388 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2962 Tpr-Chr2 33966158 33968935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2962 19 643 Receptor kinase-like Gene Family AT1G11050 63.317 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tpr2g2962 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2962 - - gmx:100806560 1028.08