Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2959 ATGTCGGAAGAGGTTGGATCCATGTTGGCAGTTTATGATGATCCATCTGACCAACATTCACTGTCTTTCGGCGGCGATACAAGCAGCACCGAGGAATCCCCCGGTGAAACTAGACTCTCCTTGCAACCAACTAATGATCACATTCCATACATTGGTCAAAGATTTTCCACCCATGATGAAGCTTATGAATTCTATAGTGATTTTGCTAAGAGTTGCGGCTTCTCAATTAGACGTCACCGTACAGAGGGAAAAGATGGTGTTGGGAAAGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGTAACACTCCTGCTAAATCAACGAACGAAACTAAACCTCAAAGAAATAGAAAATCTTCTCGATGTGGTTGTCAGGCTTATATGAGGATAAGCAAAACGACGGAGTTTGGACCTCCAGAATGGCGTGTCACTGGTTTTGGTAACCACCATAATCATGAACTTTTGGAACCAAATCAAGTTCGGTTCCTTCCTGCATATAGAACTATATCAGATGTTGACAAAAATCGAATCCTTATGTTTGCCAAAACAGGGATTTCTGTTCATCAAATGATGAGGCTTATGGAGCTTGAGAAGTGCGTGGAACCAGGATATTTGCCTTTTACTGAAAAGGATGTAAGGAATTTACTCCAGTCGTTTAGAAAATTAGATCCAGAAGAAGAAAACCTAGATCTGTTAAGAATGTGCAGAAATATTAAGGAGAGAGATCCTAATTTTAAATTTGAGTACACACTTGATGCAAACAACCGTTTAGAAAATATTGCCTGGTCATATGCCTCGTCGATCCAATTGTATGATATTTTTGGTGATGCCGTGGTATTTGATACAACACATCGTCTGACTGCATTTGACATGCCGTTGGGGATATGGGTTGGAATAAATAATTATGGAATGCCCTGCTTCTTTGGCTGTGTGCTACTGCGAGATGAAACTGTCAGGTCATATTCCTGGGCAATAAAGGCTTTCTTAGGTTTTATGAATGGGAAGGCTCCACAGACTATATTAACCGACCAAAACAGTTGTCTCAAAGATGCACTATCTGCAGAAATGTCGATAACAAAACATGCTTTATGCATATGGATGATAGTAGCAAAGTTTCCATCTTGGTTCAATGCTGTTGTAGGGGAACGCTACAATGAATGGAAGGCTGAGTTTTATAGACTTTATAATCTTGAATCAGTTGAGGATTTTGAACTTGGGTGGAGAGAAATGGTATGTTCTTTTGGGCTGCATACCAATCGGCACATTGTTAATTTATATAGCTTGCGCTCACTTTGGGCATTGCCATATTTAAGAAGCCATTTTCTTGCGGGAATGACTACAACTGGCCTGTCAAAGTCAATTAATGCCTTCATTCAACGGTTTCTAAGTGCACAGACACGACTTGCTCACTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTTAAAGATCAAACTGGAGAACAACAAACCATGCAGCAGAATCTCCAAAATGTTTGCCTCAAAACAGGAGCCCCCATGGAATCACATGCTGCTACGGTCCTCACGCCTTTTGCCTTTTCCAAGCTTCAAGAAGAACTTGTGTTGGCTGCGCATTATGCATCTTTTTCAGTTGAAGATGGTTTTCTTGTGAGACATCACACAAAAGTTGAAGGAGGTCGCAAAGTTTATTGGTCCCCTCATGAAGGAATTATAAGCTGCAGCTGTCACCAGTTTGAATTTTCTGGAATTTTGTGTAGGCACACTCTGAGAGTTCTTTCAACAGGAAATTGTTTTCAGATTCCAGATACATATCTTCCCATTCGATGGCGTCGTATCAGCGTGCCTTCTTCTAAGCTTGTTCACAATGCACCCAATGATCATGCCGAAAGAGTTAAGTTATTCCAAAATATGGTTTCATCTCTAATTACAGAGTCTGCTAAGTCTAAAGAACGATTAGATACTGCAACAGAACAAGTTTCCATTCTTCTGTCTCGCATAAGAGAGCAGCCAATTTCATTACAATGTGCCAGAGATATTTCAACCATTAATAGGAATCTATGA 2043 0.4053 MSEEVGSMLAVYDDPSDQHSLSFGGDTSSTEESPGETRLSLQPTNDHIPYIGQRFSTHDEAYEFYSDFAKSCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPAKSTNETKPQRNRKSSRCGCQAYMRISKTTEFGPPEWRVTGFGNHHNHELLEPNQVRFLPAYRTISDVDKNRILMFAKTGISVHQMMRLMELEKCVEPGYLPFTEKDVRNLLQSFRKLDPEEENLDLLRMCRNIKERDPNFKFEYTLDANNRLENIAWSYASSIQLYDIFGDAVVFDTTHRLTAFDMPLGIWVGINNYGMPCFFGCVLLRDETVRSYSWAIKAFLGFMNGKAPQTILTDQNSCLKDALSAEMSITKHALCIWMIVAKFPSWFNAVVGERYNEWKAEFYRLYNLESVEDFELGWREMVCSFGLHTNRHIVNLYSLRSLWALPYLRSHFLAGMTTTGLSKSINAFIQRFLSAQTRLAHFVEQVAVAVDFKDQTGEQQTMQQNLQNVCLKTGAPMESHAATVLTPFAFSKLQEELVLAAHYASFSVEDGFLVRHHTKVEGGRKVYWSPHEGIISCSCHQFEFSGILCRHTLRVLSTGNCFQIPDTYLPIRWRRISVPSSKLVHNAPNDHAERVKLFQNMVSSLITESAKSKERLDTATEQVSILLSRIREQPISLQCARDISTINRNL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2959 680 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 13 674 - -
Tpr2g2959 680 Pfam MULE transposase domain 279 371 IPR018289 -
Tpr2g2959 680 SMART 26again6 565 592 IPR006564 GO:0008270
Tpr2g2959 680 Pfam SWIM zinc finger 562 588 IPR007527 GO:0008270
Tpr2g2959 680 Pfam FAR1 DNA-binding domain 63 156 IPR004330 -
Tpr2g2959 680 ProSiteProfiles Zinc finger SWIM-type profile. 554 590 IPR007527 GO:0008270
Tpr2g2959 680 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 13 674 IPR031052 GO:0006355
Tpr2g2959 680 MobiDBLite consensus disorder prediction 1 45 - -
Tpr2g2959 680 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2959 Tpr-Chr2 33935319 33938731 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g2959 MULE 9.8e-17 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2959 - - gmx:100810717 1268.83