Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g2957 ATGAGACTGAAGAAGCAGAAGAATATGGGGAGAAGAAACAACGGCGGTGGTGGTGGTGGCGGCGGAGGAGGAGGAAGGTCTCTGCAATTTGCTCTTCGCCGACGAGTTGAATCATGCAAATCAAAGTACACAACCCCCGAAGAAATCGTCGATCATCTTCGCTCCAATTACCCTGATTACCACCGAACTAAGGGCCAACAACTCCTTCGATTTGTTAACGATGCTCTTCAATTCTCCAATAATACTCCCTCACGGAAACCTAACCAGAAAAGCAATGCCGCCGCCGACGAAGATGACGACGATGATGATGAAGAAGAGTATCGAAATTCTTCTCGAAAGAGACGTAAGGATATTATTACCGATGAATGTGAAGCTCGATTGCAGAAAATTGAATCTCTTCATATCAAATCAAGGATGAGTAAGCAGATTCCATCATCTTCCTCCGAACCTGCTTCCAATAACAGTGAAGATGGTGAGGACGGTGCAGTTTCGACTTCAGAGGACGCGATTTATAGTGAGAAAGTTGAACCTGCTTTTGATTTGATGAAAGACATGCTGCGAAATTCATATACAGGGGCGAAAACGGTACCTGTGGTGGTGGCGGAGGAAAAGAATGTCGAATTGGATATGGGGAATTCAAGTAAAGCTACTATTACTGTTAATAGGAATGGCGGTGAACCACCGAAGTTGTATCGGACTACAAAGATACGATTGAAGGGTTTGGGTACGGGTTCTAATGTTGCCGGTGGTGGCGGTGTTGGTGTTGTTGAGATGAAAGGGAAGGAGGGTCCAATGTTTAAGGATTTGGGTGGGATGAAAGATATATTGGAAGAATTGATGATGGATATTGTGTCATTGTGCAATCCTCAATTGCCTAGACATTTGGGAGTGAAACCGGTGACTGGAATTTTGTTACATGGACCACCTGGTTGTGGAAAGACTAGACTTGCTCATGCTATAGCGAATGAAACCGGTCTTCCTTTTCATCATATTTCGGCTACGGAGGTTGTTTCTGGAGTCTCAGGTGCATCCGAAGAATATATTAGGGAGCTTTTTGATAAAGCAAAAAGGACTGCTCCGTCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCGAAAAGAGAGAATTTACAGCGTGAAATGGAGAAACGAATTGTGACCCAGTTAATGACTTCCATGGATGAGCCGGAGAGTTCTGATGAACCTCGTGGCTATGTTCTTGTAATTGGAGCCACAAATAGGCCTGATTCTCTTGACCCTGCTCTTAGACGGCCTGGTAGGTTTGATCGTGAGTTTTTGGTTGGCGTTCCTGACGAATCTTCCAGGGAGGAGATCCTTTCCGTGCTTACTCGCAATCTTAAACTTGATGGTTCATTTGATCTGCGCAAAATAGCCAGGTCTACGCCAGGATTTGTTGGTGCTGATTTGGCAGCTCTGGCTAACAAAGCTGGTAATCTGGCAATGAAGAGGATAATTGATGAAAGGAAACGTGAATTATCTCAAGATCTCATGAGCGAGAATACAAAAGGCTGGTGGAGAGAACCTTGGTTGCCTGAAGAAATAAATAAGCTTGCTATCAAGATGTCTGATTTTGAGGAAGCAGCCAAAATGGTGCAACCTTCAGCAAGAAGAGAAGGGTTCTCTTCCATTCCTAATGTCAAATGGGAAGATGTTGGTGGGCTTGATATTTTAAGGCATGAGTTTGATCGCTACATTGTAAGGCGTATAAAATATCCTGAGTATTATGAGGGAATTGGGATGAATCTTGAATCTGGATTCTTGCTTTATGGACCTCCGGGTTGTGGTAAAACACTGATTGCCAAGGCTGTTGCCAATGAGGCTGGAGCTAATTTCATTCATATCAAGGGACCTGAGCTTCTAAATAAATATGTTGGGGAAAGTGAGCTTGCAGTGCGGACATTGTTTAATCGTGCAAGGACTTGTGCACCATGTGTACTATTTTTTGATGAGGTTGATGCTCTGACTACTGAACGCGGTAAAGAAGGTGGATGGGTTATTGAAAGACTATTGAACCAGTTGCTTATCGAGTTAGATGGCGCTGAGCAGCGGAGAGGCGTTTTTGTGATTGGTGCAACAAATAGGCCTGAGGTGATGGACCGCGCTCTCTTACGGCCTGGCAGGTTTGGTAAACTGCTTTATGTTCCTCTTCCAAGTCCAGACGACCGTGTTTTGATTTTGAAAGCTCTTGCAAGAAATAAACATATTGATTCTAGTGTGGATTTGAGTGCCATTGGAAGAATGGAAGCATGTGAAAACCTTAGTGGTGCTGATCTTGCAGAATTGATGAACGAAGCAGTAATGGCTGCTCTTGATGAGAAGTTGGCCTCAATTGAGACAACTTGTGAATCATTGACCATTAGGACAAGTCATTTTGAAGTAGCACTAAGTAAAGTTTCTCCATCCGTGTCGGACAAGCAAAGGCAGTACTATGAGCGTTTGTCAAGAAGCCTTAAAGCGGCATGA 2487 0.4379 MRLKKQKNMGRRNNGGGGGGGGGGGRSLQFALRRRVESCKSKYTTPEEIVDHLRSNYPDYHRTKGQQLLRFVNDALQFSNNTPSRKPNQKSNAAADEDDDDDDEEEYRNSSRKRRKDIITDECEARLQKIESLHIKSRMSKQIPSSSSEPASNNSEDGEDGAVSTSEDAIYSEKVEPAFDLMKDMLRNSYTGAKTVPVVVAEEKNVELDMGNSSKATITVNRNGGEPPKLYRTTKIRLKGLGTGSNVAGGGGVGVVEMKGKEGPMFKDLGGMKDILEELMMDIVSLCNPQLPRHLGVKPVTGILLHGPPGCGKTRLAHAIANETGLPFHHISATEVVSGVSGASEEYIRELFDKAKRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDEPESSDEPRGYVLVIGATNRPDSLDPALRRPGRFDREFLVGVPDESSREEILSVLTRNLKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQDLMSENTKGWWREPWLPEEINKLAIKMSDFEEAAKMVQPSARREGFSSIPNVKWEDVGGLDILRHEFDRYIVRRIKYPEYYEGIGMNLESGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFNRARTCAPCVLFFDEVDALTTERGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDRALLRPGRFGKLLYVPLPSPDDRVLILKALARNKHIDSSVDLSAIGRMEACENLSGADLAELMNEAVMAALDEKLASIETTCESLTIRTSHFEVALSKVSPSVSDKQRQYYERLSRSLKAA* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g2957 828 MobiDBLite consensus disorder prediction 138 160 - -
Tpr2g2957 828 MobiDBLite consensus disorder prediction 79 114 - -
Tpr2g2957 828 Gene3D - 438 546 - -
Tpr2g2957 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 823 IPR027417 -
Tpr2g2957 828 Gene3D - 253 436 IPR027417 -
Tpr2g2957 828 PANTHER AAA-FAMILY ATPASE 34 823 - -
Tpr2g2957 828 CDD AAA 592 724 - -
Tpr2g2957 828 ProSitePatterns AAA-protein family signature. 407 425 IPR003960 GO:0005524|GO:0016887
Tpr2g2957 828 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 34 823 - -
Tpr2g2957 828 Pfam ATPase family associated with various cellular activities (AAA) 595 723 IPR003959 GO:0005524|GO:0016887
Tpr2g2957 828 Pfam ATPase family associated with various cellular activities (AAA) 303 436 IPR003959 GO:0005524|GO:0016887
Tpr2g2957 828 Coils Coil 775 795 - -
Tpr2g2957 828 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 542 IPR027417 -
Tpr2g2957 828 MobiDBLite consensus disorder prediction 135 169 - -
Tpr2g2957 828 Pfam AAA+ lid domain 746 787 IPR041569 -
Tpr2g2957 828 Pfam AAA+ lid domain 460 495 IPR041569 -
Tpr2g2957 828 ProSitePatterns AAA-protein family signature. 694 712 IPR003960 GO:0005524|GO:0016887
Tpr2g2957 828 Gene3D - 552 819 IPR027417 -
Tpr2g2957 828 CDD AAA 302 436 - -
Tpr2g2957 828 SMART AAA_5 590 726 IPR003593 -
Tpr2g2957 828 SMART AAA_5 299 439 IPR003593 -
Tpr2g2957 828 Gene3D - 725 804 - -
Tpr2g2957 828 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g2957 Tpr-Chr2 33915637 33920921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g2957 295 823 Calmodulin-binding Proteins AT3G56690 38.356 6.79e-121 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g2957 K14571 - gmx:100809594 1080.47